Debian 12 (Bookworm) native package

python3-ost

Open-Source Computational Structural Biology Framework - Python 3 package

Packages / Debian 12 (Bookworm) / python / python3-ost

[Source: openstructure]

Package: python3-ost (2.3.1-9)

Maintainers:

Debichem Team

External Resources:

Homepage: [www.openstructure.org]

Similar packages:

[libost-base2.3]
Open-Source Computational Structural Biology Framework
[libost-base-dev]
Open-Source Computational Structural Biology Framework
[libost-bindings2.3]
Open-Source Computational Structural Biology Framework
[libost-bindings-dev]
Open-Source Computational Structural Biology Framework
[libost-conop2.3]
Open-Source Computational Structural Biology Framework
[libost-conop-dev]
Open-Source Computational Structural Biology Framework
[libost-db2.3]
Open-Source Computational Structural Biology Framework
[libost-db-dev]
Open-Source Computational Structural Biology Framework
[libost-geom2.3]
Open-Source Computational Structural Biology Framework
[libost-geom-dev]
Open-Source Computational Structural Biology Framework
[libost-gfx2.3]
Open-Source Computational Structural Biology Framework
[libost-gfx-dev]
Open-Source Computational Structural Biology Framework
[libost-gui2.3]
Open-Source Computational Structural Biology Framework
[libost-gui-dev]
Open-Source Computational Structural Biology Framework
[libost-img2.3]
Open-Source Computational Structural Biology Framework
[libost-img-alg2.3]
Open-Source Computational Structural Biology Framework
[libost-img-alg-dev]
Open-Source Computational Structural Biology Framework
[libost-img-dev]
Open-Source Computational Structural Biology Framework
[libost-info2.3]
Open-Source Computational Structural Biology Framework
[libost-info-dev]
Open-Source Computational Structural Biology Framework
[libost-io2.3]
Open-Source Computational Structural Biology Framework
[libost-io-dev]
Open-Source Computational Structural Biology Framework
[libost-mol2.3]
Open-Source Computational Structural Biology Framework
[libost-mol-alg2.3]
Open-Source Computational Structural Biology Framework
[libost-mol-alg-dev]
Open-Source Computational Structural Biology Framework
[libost-mol-dev]
Open-Source Computational Structural Biology Framework
[libost-mol-mm2.3]
Open-Source Computational Structural Biology Framework
[libost-mol-mm-dev]
Open-Source Computational Structural Biology Framework
[libost-seq2.3]
Open-Source Computational Structural Biology Framework
[libost-seq-alg2.3]
Open-Source Computational Structural Biology Framework
[libost-seq-alg-dev]
Open-Source Computational Structural Biology Framework
[libost-seq-dev]
Open-Source Computational Structural Biology Framework

Open-Source Computational Structural Biology Framework - Python 3 package

Other Packages Related to python3-ost:

dep: [python3-matplotlib]
Python based plotting system in a style similar to Matlab (Python 3)
dep: [python3-numpy]
Fast array facility to the Python 3 language
dep: [python3-pil]
Python Imaging Library (Python3)
dep: [python3-pyqt5]
Python 3 bindings for Qt5
dep: [python3] (<< 3.12)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.11~)
interactive high-level object-oriented language (default python3 version)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libboost-filesystem1.74.0] (>= 1.74.0+ds1)
filesystem operations (portable paths, iteration over directories, etc) in C++
dep: [libboost-python1.74.0] (>= 1.74.0+ds1)
Boost.Python Library
dep: libboost-python1.74.0-py311
Package not available
dep: [libc6] (>= 2.32)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [libopenmm7.7] (>= 7.7.0+dfsg)
High-performance molecular simulation library
dep: [libost-base2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-bindings2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-conop2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-db2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-geom2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-gfx2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-gui2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-img-alg2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-img2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-info2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-io2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-mol-alg2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-mol-mm2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-mol2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-seq-alg2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libost-seq2.3] (>= 2.3.1)
Open-Source Computational Structural Biology Framework
dep: [libpython3.11] (>= 3.11.0)
Shared Python runtime library (version 3.11)
dep: [libqt5core5a] (>= 5.15.1)
Qt 5 core module
dep: [libqt5gui5] (>= 5.2.0)
Qt 5 GUI module
dep: [libqt5gui5-gles] (>= 5.2.0)
Qt 5 GUI module — OpenGL ES variant
dep: [libqt5widgets5] (>= 5.0.2)
Qt 5 widgets module
dep: [libstdc++6] (>= 11)
GNU Standard C++ Library v3

Download python3-ost

Architecture	Package Size	Installed Size	Files
amd64	3.6 MiB	27 MiB	[list of files]

Package file paths (125)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/lib/python3/dist-packages/ost/bindings/blast.py
/usr/lib/python3/dist-packages/ost/bindings/cadscore.py
/usr/lib/python3/dist-packages/ost/bindings/clustalw.py
/usr/lib/python3/dist-packages/ost/bindings/dssp.py
/usr/lib/python3/dist-packages/ost/bindings/hbplus.py
/usr/lib/python3/dist-packages/ost/bindings/hhblits2.py
/usr/lib/python3/dist-packages/ost/bindings/hhblits3.py
/usr/lib/python3/dist-packages/ost/bindings/hhblits.py
/usr/lib/python3/dist-packages/ost/bindings/ialign.py
/usr/lib/python3/dist-packages/ost/bindings/__init__.py
/usr/lib/python3/dist-packages/ost/bindings/kclust.py
/usr/lib/python3/dist-packages/ost/bindings/lga.py
/usr/lib/python3/dist-packages/ost/bindings/mmseqs2.py
/usr/lib/python3/dist-packages/ost/bindings/msms.py
/usr/lib/python3/dist-packages/ost/bindings/naccess.py
/usr/lib/python3/dist-packages/ost/bindings/_ost_bindings.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/bindings/tmtools.py
/usr/lib/python3/dist-packages/ost/bindings/utils.py
/usr/lib/python3/dist-packages/ost/conop/cleanup.py
/usr/lib/python3/dist-packages/ost/conop/__init__.py
/usr/lib/python3/dist-packages/ost/conop/_ost_conop.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/db/__init__.py
/usr/lib/python3/dist-packages/ost/db/_ost_db.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/dng_startup.py
/usr/lib/python3/dist-packages/ost/geom/__init__.py
/usr/lib/python3/dist-packages/ost/geom/_ost_geom.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/gfx/__init__.py
/usr/lib/python3/dist-packages/ost/gfx/_ost_gfx.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/gfx/py_gfx_obj.py
/usr/lib/python3/dist-packages/ost/gui/dng/__init__.py
/usr/lib/python3/dist-packages/ost/gui/dng/init.py
/usr/lib/python3/dist-packages/ost/gui/dng/menu.py
/usr/lib/python3/dist-packages/ost/gui/dng/superpositiondialog.py
/usr/lib/python3/dist-packages/ost/gui/dng/termuse.py
/usr/lib/python3/dist-packages/ost/gui/gosty_startup.py
/usr/lib/python3/dist-packages/ost/gui/helpwidget.py
/usr/lib/python3/dist-packages/ost/gui/init_context_menu.py
/usr/lib/python3/dist-packages/ost/gui/init_menubar.py
/usr/lib/python3/dist-packages/ost/gui/__init__.py
/usr/lib/python3/dist-packages/ost/gui/init_spacenav.py
/usr/lib/python3/dist-packages/ost/gui/init_splash.py
/usr/lib/python3/dist-packages/ost/gui/_ost_gui.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/gui/scene/color_options_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/color_select_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/combo_options_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/cpk_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/custom_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/gradient_editor_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/gradient_info_handler.py
/usr/lib/python3/dist-packages/ost/gui/scene/gradient_list_model.py
/usr/lib/python3/dist-packages/ost/gui/scene/gradient_preset_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/hsc_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/immutable_gradient_info_handler.py
/usr/lib/python3/dist-packages/ost/gui/scene/immutable_preset_info_handler.py
/usr/lib/python3/dist-packages/ost/gui/scene/init_inspector.py
/usr/lib/python3/dist-packages/ost/gui/scene/__init__.py
/usr/lib/python3/dist-packages/ost/gui/scene/inspector_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/line_trace_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/map_level_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset_editor_list_model.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset_editor_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset_info_handler.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset_list_model.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset.py
/usr/lib/python3/dist-packages/ost/gui/scene/preset_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/query_editor.py
/usr/lib/python3/dist-packages/ost/gui/scene/remote.py
/usr/lib/python3/dist-packages/ost/gui/scene/render_mode_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/render_op.py
/usr/lib/python3/dist-packages/ost/gui/scene/render_options_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/scene_observer_impl.py
/usr/lib/python3/dist-packages/ost/gui/scene/scene_selection_helper.py
/usr/lib/python3/dist-packages/ost/gui/scene/simple_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/sline_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/toolbar_options_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/trace_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/tube_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/uniform_color_widget.py
/usr/lib/python3/dist-packages/ost/gui/scene/visibility_op.py
/usr/lib/python3/dist-packages/ost/gui/scene/wireframe_widget.py
/usr/lib/python3/dist-packages/ost/gui/table.py
/usr/lib/python3/dist-packages/ost/gui/trajectory_viewer.py
/usr/lib/python3/dist-packages/ost/img/alg/__init__.py
/usr/lib/python3/dist-packages/ost/img/alg/_ost_img_alg.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/img/__init__.py
/usr/lib/python3/dist-packages/ost/img/_ost_img.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/info/__init__.py
/usr/lib/python3/dist-packages/ost/info/_ost_info.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/__init__.py
/usr/lib/python3/dist-packages/ost/io/__init__.py
/usr/lib/python3/dist-packages/ost/io/_ost_io.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/io/remote.py
/usr/lib/python3/dist-packages/ost/io/repository.py
/usr/lib/python3/dist-packages/ost/mol/alg/hbond.py
/usr/lib/python3/dist-packages/ost/mol/alg/helix_kinks.py
/usr/lib/python3/dist-packages/ost/mol/alg/__init__.py
/usr/lib/python3/dist-packages/ost/mol/alg/_ost_mol_alg.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/mol/alg/qsscoring.py
/usr/lib/python3/dist-packages/ost/mol/alg/structure_analysis.py
/usr/lib/python3/dist-packages/ost/mol/alg/superpose.py
/usr/lib/python3/dist-packages/ost/mol/alg/trajectory_analysis.py
/usr/lib/python3/dist-packages/ost/mol/alg/views.py
/usr/lib/python3/dist-packages/ost/mol/__init__.py
/usr/lib/python3/dist-packages/ost/mol/mm/antechamber.py
/usr/lib/python3/dist-packages/ost/mol/mm/__init__.py
/usr/lib/python3/dist-packages/ost/mol/mm/_ost_mol_mm.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/mol/_ost_mol.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/_ost_base.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/ost_startup.py
/usr/lib/python3/dist-packages/ost/seq/alg/aaindex.py
/usr/lib/python3/dist-packages/ost/seq/alg/__init__.py
/usr/lib/python3/dist-packages/ost/seq/alg/mat.py
/usr/lib/python3/dist-packages/ost/seq/alg/_ost_seq_alg.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/seq/alg/renumber.py
/usr/lib/python3/dist-packages/ost/seq/__init__.py
/usr/lib/python3/dist-packages/ost/seq/_ost_seq.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/ost/settings.py
/usr/lib/python3/dist-packages/ost/stutil.py
/usr/lib/python3/dist-packages/ost/table.py
/usr/lib/python3/dist-packages/ost/table_selector.py
/usr/lib/python3/dist-packages/ost/testutils.py
/usr/lib/python3/dist-packages/ost/xmlrunner.py
/usr/share/doc/python3-ost/changelog.Debian.gz
/usr/share/doc/python3-ost/changelog.gz
/usr/share/doc/python3-ost/copyright

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.3.1-9	bookworm / main	amd64	Debian 12 · main · amd64	3.6 MiB	27 MiB	pool/main/o/openstructure/python3-ost_2.3.1-9_amd64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.3.1-9 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 899eacd55aad3b6357679cd2f7a9dbdd033e02e7ffdace110c65656c794c7f6e

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '899eacd55aad3b6357679cd2f7a9dbdd033e02e7ffdace110c65656c794c7f6e' 'python3-ost_2.3.1-9_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified