Debian 12 (Bookworm) native package

sortmerna

tool for filtering, mapping and OTU-picking NGS reads

Packages / Debian 12 (Bookworm) / science / sortmerna

Package: sortmerna (4.3.6-2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [bioinfo.lifl.fr]

tool for filtering, mapping and OTU-picking NGS reads

Other Packages Related to sortmerna:

dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.0)
GCC support library
dep: [librocksdb7.8] (>= 7.8.3)
persistent Key-Value Store for Flash and RAM Storage
dep: [libstdc++6] (>= 11)
GNU Standard C++ Library v3
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime

rec: [python3]
interactive high-level object-oriented language (default python3 version)

Download sortmerna

Architecture	Package Size	Installed Size	Files
amd64	550 KiB	1.7 MiB	[list of files]

Package file paths (18)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/sortmerna
/usr/share/doc/sortmerna/AUTHORS
/usr/share/doc/sortmerna/changelog.Debian.gz
/usr/share/doc/sortmerna/changelog.gz
/usr/share/doc/sortmerna/copyright
/usr/share/doc/sortmerna/examples/CMakeLists.txt
/usr/share/doc/sortmerna/examples/kvdb.cpp
/usr/share/doc/sortmerna/examples/main.cpp
/usr/share/doc/sortmerna/NEWS.Debian.gz
/usr/share/doc/sortmerna/README.Debian
/usr/share/doc/sortmerna/README.md.gz
/usr/share/lintian/overrides/sortmerna
/usr/share/man/man1/sortmerna.1.gz
/usr/share/sortmerna/rRNA_databases/scripts/fetch_rrna_data.sh
/usr/share/sortmerna/scripts/build.py
/usr/share/sortmerna/scripts/env.jinja
/usr/share/sortmerna/scripts/run.py
/usr/share/sortmerna/scripts/test.jinja

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
4.3.6-2	bookworm / main	amd64	Debian 12 · main · amd64	550 KiB	1.7 MiB	pool/main/s/sortmerna/sortmerna_4.3.6-2_amd64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

4.3.6-2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: df7cadcdea1b130a689d4359aaaca44600877f06210e7e3eab766b0cb86dd37a

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'df7cadcdea1b130a689d4359aaaca44600877f06210e7e3eab766b0cb86dd37a' 'sortmerna_4.3.6-2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified