Debian 12 (Bookworm) native package

uncalled

Utility for Nanopore Current Alignment to Large Expanses of DNA

Packages / Debian 12 (Bookworm) / science / uncalled

[Source: uncalled]

Package: uncalled (2.2+ds1-1+b3)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Utility for Nanopore Current Alignment to Large Expanses of DNA

Other Packages Related to uncalled:

dep: [python3] (<< 3.12)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.11~)
interactive high-level object-oriented language (default python3 version)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 3.4)
GCC support library
dep: [libhdf5-103-1]
HDF5 C runtime files - serial version
dep: [libstdc++6] (>= 11)
GNU Standard C++ Library v3
dep: [zlib1g] (>= 1:1.1.4)
compression library - runtime
dep: [python3-numpy]
Fast array facility to the Python 3 language

Download uncalled

Architecture	Package Size	Installed Size	Files
amd64	538 KiB	1.8 MiB	[list of files]

Package file paths (32)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/uncalled
/usr/lib/python3/dist-packages/uncalled-2.2.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/uncalled-2.2.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/uncalled-2.2.egg-info/top_level.txt
/usr/lib/python3/dist-packages/uncalled/args.py
/usr/lib/python3/dist-packages/uncalled/conf/defaults.toml
/usr/lib/python3/dist-packages/uncalled/conf/r94_5mers_threshs.txt
/usr/lib/python3/dist-packages/uncalled/conf/r94_5mers.txt
/usr/lib/python3/dist-packages/_uncalled.cpython-311-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/_uncalled.cpython-311-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/uncalled/debug.py
/usr/lib/python3/dist-packages/uncalled/index.py
/usr/lib/python3/dist-packages/uncalled/__init__.py
/usr/lib/python3/dist-packages/uncalled/minknow_client.py
/usr/lib/python3/dist-packages/uncalled/pafstats.py
/usr/lib/python3/dist-packages/uncalled/sim_utils.py
/usr/share/doc/uncalled/changelog.Debian.amd64.gz
/usr/share/doc/uncalled/changelog.Debian.arm64.gz
/usr/share/doc/uncalled/changelog.Debian.gz
/usr/share/doc/uncalled/copyright
/usr/share/doc/uncalled/examples/example_ref.fa
/usr/share/doc/uncalled/examples/fast5_filename.txt
/usr/share/doc/uncalled/examples/GXB01153_20180730_FAH86930_GA30000_mux_scan_Zymo_CS_LSK109_29137_read_101_ch_486_strand.fast5
/usr/share/doc/uncalled/examples/index/example_ref.amb
/usr/share/doc/uncalled/examples/index/example_ref.ann
/usr/share/doc/uncalled/examples/index/example_ref.bwt
/usr/share/doc/uncalled/examples/index/example_ref.pac
/usr/share/doc/uncalled/examples/index/example_ref.sa
/usr/share/doc/uncalled/examples/index/example_ref.uncl
/usr/share/doc/uncalled/examples/README.md
/usr/share/doc/uncalled/examples/run_example.sh
/usr/share/lintian/overrides/uncalled

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

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Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.2+ds1-1+b3	bookworm / main	amd64	Debian 12 · main · amd64	538 KiB	1.8 MiB	pool/main/u/uncalled/uncalled_2.2+ds1-1+b3_amd64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.2+ds1-1+b3 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 32710a752b39faf4113ffea852f4c0cccd44dc6e740d28ff6bc00a80b2547ab9

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '32710a752b39faf4113ffea852f4c0cccd44dc6e740d28ff6bc00a80b2547ab9' 'uncalled_2.2+ds1-1+b3_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified