Debian 13 (Trixie) native package

python3-gemmi

library for structural biology - Python module

Packages / Debian 13 (Trixie) / python / python3-gemmi

[Source: gemmi]

Package: python3-gemmi (0.6.5+ds-3)

Maintainers:

Debichem Team

External Resources:

Homepage: [project-gemmi.github.io]

Similar packages:

[gemmi-dev]
library for structural biology

library for structural biology - Python module

Other Packages Related to python3-gemmi:

dep: [python3] (<< 3.14)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.13~)
interactive high-level object-oriented language (default python3 version)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.38)
GNU C Library: Shared libraries
dep: [libgcc-s1] (>= 4.2)
GCC support library
dep: [libstdc++6] (>= 14)
GNU Standard C++ Library v3
dep: [zlib1g] (>= 1:1.2.6)
compression library - runtime

Download python3-gemmi

Architecture	Package Size	Installed Size	Files
arm64	1.9 MiB	7.3 MiB	[list of files]

Package file paths (28)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/lib/python3/dist-packages/gemmi.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/gemmi.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/gemmi/examples/aafreq.py
/usr/lib/python3/dist-packages/gemmi/examples/ccd_gi.py
/usr/lib/python3/dist-packages/gemmi/examples/ccd_subgraph.py
/usr/lib/python3/dist-packages/gemmi/examples/cif_i_sigi.py
/usr/lib/python3/dist-packages/gemmi/examples/col_order.py
/usr/lib/python3/dist-packages/gemmi/examples/from_json.py
/usr/lib/python3/dist-packages/gemmi/examples/hello.py
/usr/lib/python3/dist-packages/gemmi/examples/long_geom.py
/usr/lib/python3/dist-packages/gemmi/examples/map2mtz.py
/usr/lib/python3/dist-packages/gemmi/examples/maskcheck.py
/usr/lib/python3/dist-packages/gemmi/examples/maskdiff.py
/usr/lib/python3/dist-packages/gemmi/examples/matthews.py
/usr/lib/python3/dist-packages/gemmi/examples/merge_mtz_mmcif.py
/usr/lib/python3/dist-packages/gemmi/examples/monomers.py
/usr/lib/python3/dist-packages/gemmi/examples/mtrix_iso.py
/usr/lib/python3/dist-packages/gemmi/examples/mtz_i_sigi.py
/usr/lib/python3/dist-packages/gemmi/examples/multiproc.py
/usr/lib/python3/dist-packages/gemmi/examples/patterson_slice.py
/usr/lib/python3/dist-packages/gemmi/examples/rama_gather.py
/usr/lib/python3/dist-packages/gemmi/examples/rama_plot.py
/usr/lib/python3/dist-packages/gemmi/examples/refln-stats.py
/usr/lib/python3/dist-packages/gemmi/examples/simple_search.py
/usr/lib/python3/dist-packages/gemmi/examples/sub_ccd.py
/usr/lib/python3/dist-packages/gemmi/examples/weight.py
/usr/share/doc/python3-gemmi/changelog.Debian.gz
/usr/share/doc/python3-gemmi/copyright

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

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OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

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Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
0.6.5+ds-3	trixie / main	arm64	Debian 13 · main · arm64	1.9 MiB	7.3 MiB	pool/main/g/gemmi/python3-gemmi_0.6.5+ds-3_arm64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

0.6.5+ds-3 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 129c69f9f0b3445f2cb017d0258b400355d6b4888a3a2e8c3aa21ede76745c9c

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '129c69f9f0b3445f2cb017d0258b400355d6b4888a3a2e8c3aa21ede76745c9c' 'python3-gemmi_0.6.5+ds-3_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified