Package: sra-toolkit (3.2.1+dfsg-4) utilities for the NCBI Sequence Read Archive Other Packages Related to sra-toolkit: [libabsl20240722 ] (>= 20240722.0-1)
extensions to the C++ standard library
[libbz2-1.0 ]
high-quality block-sorting file compressor library - runtime
[libc6 ] (>= 2.38)
GNU C Library: Shared libraries
[libgcc-s1 ] (>= 3.0)
GCC support library
[libhdf5-310 ] (>= 1.14.3)
HDF5 C runtime files - serial version
[libmagic1t64 ] (>= 5.12)
Recognize the type of data in a file using "magic" numbers - library
[libncbi-vdb3 ] (>= 3.2.1+dfsg)
libraries for using data in the INSDC Sequence Read Archives
[libncbi-wvdb3 ] (>= 3.2.1+dfsg)
virtual layer update module of ncbi-vdb library
Package not available
[libstdc++6 ] (>= 14)
GNU Standard C++ Library v3
[libxml2 ] (>= 2.7.4)
GNOME XML library
[zlib1g ] (>= 1:1.2.2)
compression library - runtime
Package file paths (98) Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
/etc/ncbi/certs.kfg /etc/ncbi/default.kfg /etc/ncbi/vdb-copy.kfg /usr/bin/abi-dump /usr/bin/abi-load /usr/bin/align-cache /usr/bin/align-info /usr/bin/bam-load /usr/bin/cache-mgr /usr/bin/ccextract /usr/bin/cg-load /usr/bin/check-corrupt /usr/bin/check-redact /usr/bin/compute-coverage /usr/bin/compute-coverage-ngs /usr/bin/copycat /usr/bin/crc32sum /usr/bin/dump-blob-boundaries /usr/bin/dump-ref-fasta /usr/bin/fastconv /usr/bin/fasterq-dump /usr/bin/fastq-dump /usr/bin/fastq-load /usr/bin/general-loader /usr/bin/helicos-load /usr/bin/illumina-dump /usr/bin/illumina-load /usr/bin/kar /usr/bin/kar+ /usr/bin/kar+meta /usr/bin/kdb-index /usr/bin/kdbmeta /usr/bin/latf-load /usr/bin/make-read-filter /usr/bin/md5cp /usr/bin/meta-cmp /usr/bin/meta-copy /usr/bin/meta-repair /usr/bin/ngs-pileup /usr/bin/pacbio-correct /usr/bin/pacbio-load /usr/bin/pacbio-loadxml /usr/bin/pileup-stats /usr/bin/prefetch /usr/bin/rcexplain /usr/bin/read-filter-redact /usr/bin/ref-variation /usr/bin/rowwritetest /usr/bin/sam-dump /usr/bin/samview /usr/bin/samview-util /usr/bin/schema-replace /usr/bin/sff-dump /usr/bin/sff-load /usr/bin/sharq /usr/bin/sortreadtest /usr/bin/sra-info /usr/bin/srapath /usr/bin/sra-pileup /usr/bin/sra-search /usr/bin/sra-sort /usr/bin/sra-sort-cg /usr/bin/sra-stat /usr/bin/srf-load /usr/bin/test-download /usr/bin/testld /usr/bin/test-read-write-cursor /usr/bin/test-sra /usr/bin/txt2kdb /usr/bin/var-expand /usr/bin/vdb-config /usr/bin/vdb-copy /usr/bin/vdb-decrypt /usr/bin/vdb-diff /usr/bin/vdb-dump /usr/bin/vdb-encrypt /usr/bin/vdb-lock /usr/bin/vdb-sql /usr/bin/vdb-unlock /usr/bin/vdb-validate /usr/lib/sra-toolkit/fasterq-dump-orig /usr/lib/sra-toolkit/fastq-dump-orig /usr/lib/sra-toolkit/prefetch-orig /usr/lib/sra-toolkit/sam-dump-orig /usr/lib/sra-toolkit/srapath-orig /usr/lib/sra-toolkit/sra-pileup-orig /usr/lib/sra-toolkit/sratools /usr/lib/sra-toolkit/vdb-dump-orig /usr/share/doc/sra-toolkit/changelog.Debian.gz /usr/share/doc/sra-toolkit/changelog.gz /usr/share/doc/sra-toolkit/copyright /usr/share/doc/sra-toolkit/README-blastn /usr/share/doc/sra-toolkit/README.Debian /usr/share/doc/sra-toolkit/README.md.gz /usr/share/doc/sra-toolkit/README.test /usr/share/doc/sra-toolkit/README-vdb-config.gz /usr/share/doc/sra-toolkit/run-unit-test /usr/share/doc/sra-toolkit/test-data.tar.gz Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Use this package OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.
Versions, suites, and repositories Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.
Checksums and observation dates For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.
3.2.1+dfsg-4 / amd64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: c2a8f7933b0f86665f0669fb4559b818ccda40c9b2967e25f7297d137199ad50
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' 'c2a8f7933b0f86665f0669fb4559b818ccda40c9b2967e25f7297d137199ad50' 'sra-toolkit_3.2.1+dfsg-4_amd64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
3.2.1+dfsg-4 / arm64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: e25feb12f0ce0c7bd42416921dcf5c581b35def8ff9488568e9c4c4e9f4d75ad
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' 'e25feb12f0ce0c7bd42416921dcf5c581b35def8ff9488568e9c4c4e9f4d75ad' 'sra-toolkit_3.2.1+dfsg-4_arm64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Sources and provenance Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: main/binary-amd64/Packages.xz3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b33ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: main/binary-arm64/Packages.xz753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
