Fedora 43 native package

hmmer

Biosequence analysis using profile hidden Markov models

Packages / Fedora 43 / Unspecified / hmmer

[Source: hmmer]

Package: hmmer (3.3.2-11.fc43)

[Project overview: hmmer]

External Resources:

Homepage: [hmmer.org]

Similar packages:

[hmmer-doc]
Documentation for hmmer
[hmmer-easel]
Easel collection of small tools

Biosequence analysis using profile hidden Markov models

HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).

Other Packages Related to hmmer:

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dep: libm.so.6(GLIBC_2.27)(64bit)
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dep: libm.so.6(GLIBC_2.29)(64bit)
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dep: rtld(GNU_HASH)
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dep: libc.so.6(GLIBC_2.38)(64bit)
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Download hmmer

Architecture	Package Size	Installed Size	Files
x86_64	1.2 MiB	6.3 MiB	[list of files]

Rutas de archivos del paquete (81)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/alimask
/usr/bin/hmmalign
/usr/bin/hmmbuild
/usr/bin/hmmconvert
/usr/bin/hmmemit
/usr/bin/hmmfetch
/usr/bin/hmmlogo
/usr/bin/hmmpgmd
/usr/bin/hmmpgmd_shard
/usr/bin/hmmpress
/usr/bin/hmmscan
/usr/bin/hmmsearch
/usr/bin/hmmsim
/usr/bin/hmmstat
/usr/bin/jackhmmer
/usr/bin/makehmmerdb
/usr/bin/nhmmer
/usr/bin/nhmmscan
/usr/bin/phmmer
/usr/lib/.build-id
/usr/lib/.build-id/10
/usr/lib/.build-id/10/b3e0bf2723bc977c0dce70a2b5794c282ef9a9
/usr/lib/.build-id/17
/usr/lib/.build-id/17/716c51bf5f41606f5033af29543036f62cdc56
/usr/lib/.build-id/3e
/usr/lib/.build-id/3e/b7b2939e27a9bd30653b7b7106bb86fc809799
/usr/lib/.build-id/47
/usr/lib/.build-id/47/ba68da35662553f385a271c96a348c113f041f
/usr/lib/.build-id/4b
/usr/lib/.build-id/4b/502be6087db575c79ca66928544edb10982fd9
/usr/lib/.build-id/62
/usr/lib/.build-id/62/e4c8efd9a1fd2777d13f3a7af6c5cf2916bbc0
/usr/lib/.build-id/65
/usr/lib/.build-id/65/f18a1ea851f3db21c20f957dcdac9559b9e25f
/usr/lib/.build-id/66
/usr/lib/.build-id/66/6304ad72236d552142abb5e7aeb8974776313a
/usr/lib/.build-id/83
/usr/lib/.build-id/83/ad9ecc4d3c28b469b9e026d011b712e4b7a9db
/usr/lib/.build-id/a0
/usr/lib/.build-id/a0/a9719a5edbc5934b30f7b7f55206bd81b69028
/usr/lib/.build-id/b1
/usr/lib/.build-id/b1/19a9c5cdf72e7df9104312f2c52e2b3c57dced
/usr/lib/.build-id/c4
/usr/lib/.build-id/c4/f8b8f9152620939913f687e07c52fb1dcf8649
/usr/lib/.build-id/cc
/usr/lib/.build-id/cc/2bfa0d5af538622ee21474a335a4f48c565d29
/usr/lib/.build-id/cd
/usr/lib/.build-id/cd/99d1b961436f087f144889f9fc5439a2dd44e2
/usr/lib/.build-id/d1
/usr/lib/.build-id/d1/11019b49bc6db59b30ff8cf7c25a1c83613b1a
/usr/lib/.build-id/d5
/usr/lib/.build-id/d5/6cb5dd32fcae7d460f88a073b03fe676c185b5
/usr/lib/.build-id/e4
/usr/lib/.build-id/e4/d14353c139a8ee6b949e57780b24e06895b80e
/usr/lib/.build-id/ed
/usr/lib/.build-id/ed/5ab9af416938827e5094ac1148017ee8cbe5b4
/usr/lib/.build-id/fa
/usr/lib/.build-id/fa/c96a982c803fccfdb3b701e4045856c22352e0
/usr/share/licenses/hmmer
/usr/share/licenses/hmmer/LICENSE
/usr/share/man/man1/alimask.1.gz
/usr/share/man/man1/hmmalign.1.gz
/usr/share/man/man1/hmmbuild.1.gz
/usr/share/man/man1/hmmc2.1.gz
/usr/share/man/man1/hmmconvert.1.gz
/usr/share/man/man1/hmmemit.1.gz
/usr/share/man/man1/hmmer.1.gz
/usr/share/man/man1/hmmfetch.1.gz
/usr/share/man/man1/hmmlogo.1.gz
/usr/share/man/man1/hmmpgmd.1.gz
/usr/share/man/man1/hmmpgmd_shard.1.gz
/usr/share/man/man1/hmmpress.1.gz
/usr/share/man/man1/hmmscan.1.gz
/usr/share/man/man1/hmmsearch.1.gz
/usr/share/man/man1/hmmsim.1.gz
/usr/share/man/man1/hmmstat.1.gz
/usr/share/man/man1/jackhmmer.1.gz
/usr/share/man/man1/makehmmerdb.1.gz
/usr/share/man/man1/nhmmer.1.gz
/usr/share/man/man1/nhmmscan.1.gz
/usr/share/man/man1/phmmer.1.gz

Field source: Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2

Usar este paquete

OpenFactory puede arrancar este sistema operativo en una máquina virtual del navegador, o iniciar una construcción que incluye el nombre nativo del paquete de este registro.

Probar Fedora 43 en el navegador Construir una imagen que incluye hmmer

Versiones, suites y repositorios

Cada fila es metadato del índice de paquetes para una versión, arquitectura, suite y repositorio. Nombres, URL y tamaños vienen de la fuente; un enlace es un punto de descarga que puede cambiar, no una redistribución de OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
3.3.2-11.fc43	43 / everything	x86_64	Fedora 43 · Everything · x86_64	1.2 MiB	6.3 MiB	Packages/h/hmmer-3.3.2-11.fc43.x86_64.rpm

Field source: Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2

Sumas de comprobación y fechas de observación

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3.3.2-11.fc43 / x86_64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 4d4074a110ceaac596e54fa29d40d4e858b01168db9b2f898f7e70bda321b199

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '4d4074a110ceaac596e54fa29d40d4e858b01168db9b2f898f7e70bda321b199' 'hmmer-3.3.2-11.fc43.x86_64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2

Completitud del registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 5/5
Source package or maintainer: 10/10

Recorded total: 100/100

Field source: Fedora 43 Everything x86_64 revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fuentes y procedencia

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Fedora 43 Everything x86_64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision 43-everything-x86_64:eb1d8634a798b5cfcef64b0114711f431f2cd186b55cce902f1883a32c6ff4f2
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://mirrors.fedoraproject.org/metalink?repo=fedora-43&arch=x86_64
Signed-object SHA-256
42c0002750de6066124693fff143f4854c1e29474d893f7e6a7616012d41338f
Signer fingerprint
Not recorded
Keyring revision
RPM-GPG-KEY-fedora-43-primary
SHA-256 2b1449a082d3264dda8e18369f04e9ac4163bf3f8cb530b0783dc2ab064a08ec
Tool and policy
1
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: Not recorded
Expected SHA-256: Not recorded
Observed SHA-256: Not recorded
Result: match verified