Debian 13 (Trixie) native package

genometools

versatile genome analysis toolkit

Packages / Debian 13 (Trixie) / science / genometools

Package: genometools (1.6.5+ds-2.2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [genometools.org]

versatile genome analysis toolkit

Other Packages Related to genometools:

dep: [libbz2-1.0]
high-quality block-sorting file compressor library - runtime
dep: [libc6] (>= 2.34)
GNU C Library: Shared libraries
dep: [libcairo2] (>= 1.2.4)
Cairo 2D vector graphics library
dep: [libexpat1] (>= 2.0.1)
XML parsing C library - runtime library
dep: [libglib2.0-0t64] (>= 2.12.0)
GLib library of C routines
dep: [liblua5.1-0]
Shared library for the Lua interpreter version 5.1
dep: [libpango-1.0-0] (>= 1.14.0)
Layout and rendering of internationalized text
dep: [libpangocairo-1.0-0] (>= 1.14.0)
Layout and rendering of internationalized text
dep: [libsqlite3-0] (>= 3.5.9)
SQLite 3 shared library
dep: [libtre5] (>= 0.8.0)
regexp matching library with approximate matching
dep: [lua-filesystem] (>= 1.8.0)
luafilesystem library for the Lua language
dep: [lua-lpeg] (>= 1.0.2)
LPeg library for the Lua language
dep: [lua-md5]
MD5 library for the Lua language
dep: [zlib1g] (>= 1:1.2.3.3)
compression library - runtime
dep: [genometools-common]
shared data files for GenomeTools

Download genometools

Architecture	Package Size	Installed Size	Files
amd64	1.6 MiB	4.2 MiB	[list of files]
arm64	1.4 MiB	4.2 MiB	[list of files]

Caminhos de arquivo do pacote (100)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/gt
/usr/share/doc/genometools/changelog.Debian.gz
/usr/share/doc/genometools/changelog.gz
/usr/share/doc/genometools/CONTRIBUTORS
/usr/share/doc/genometools/copyright
/usr/share/doc/genometools/VERSION
/usr/share/man/man1/gt.1.gz
/usr/share/man/man1/gt-bed_to_gff3.1.gz
/usr/share/man/man1/gt-cds.1.gz
/usr/share/man/man1/gt-chain2dim.1.gz
/usr/share/man/man1/gt-chseqids.1.gz
/usr/share/man/man1/gt-clean.1.gz
/usr/share/man/man1/gt-compreads.1.gz
/usr/share/man/man1/gt-compreads-compress.1.gz
/usr/share/man/man1/gt-compreads-decompress.1.gz
/usr/share/man/man1/gt-compreads-refcompress.1.gz
/usr/share/man/man1/gt-compreads-refdecompress.1.gz
/usr/share/man/man1/gt-condenseq.1.gz
/usr/share/man/man1/gt-congruence.1.gz
/usr/share/man/man1/gt-congruence-spacedseed.1.gz
/usr/share/man/man1/gt-convertseq.1.gz
/usr/share/man/man1/gt-csa.1.gz
/usr/share/man/man1/gt-dot.1.gz
/usr/share/man/man1/gt-dupfeat.1.gz
/usr/share/man/man1/gt-encseq.1.gz
/usr/share/man/man1/gt-encseq2spm.1.gz
/usr/share/man/man1/gt-encseq-bench.1.gz
/usr/share/man/man1/gt-encseq-bitextract.1.gz
/usr/share/man/man1/gt-encseq-check.1.gz
/usr/share/man/man1/gt-encseq-decode.1.gz
/usr/share/man/man1/gt-encseq-encode.1.gz
/usr/share/man/man1/gt-encseq-info.1.gz
/usr/share/man/man1/gt-encseq-md5.1.gz
/usr/share/man/man1/gt-encseq-sample.1.gz
/usr/share/man/man1/gt-eval.1.gz
/usr/share/man/man1/gt-extractfeat.1.gz
/usr/share/man/man1/gt-extractseq.1.gz
/usr/share/man/man1/gt-fastq_sample.1.gz
/usr/share/man/man1/gt-featureindex.1.gz
/usr/share/man/man1/gt-fingerprint.1.gz
/usr/share/man/man1/gt-genomediff.1.gz
/usr/share/man/man1/gt-gff3.1.gz
/usr/share/man/man1/gt-gff3_to_gtf.1.gz
/usr/share/man/man1/gt-gff3validator.1.gz
/usr/share/man/man1/gt-gtf_to_gff3.1.gz
/usr/share/man/man1/gt-hop.1.gz
/usr/share/man/man1/gt-id_to_md5.1.gz
/usr/share/man/man1/gt-inlineseq_add.1.gz
/usr/share/man/man1/gt-inlineseq_split.1.gz
/usr/share/man/man1/gt-interfeat.1.gz
/usr/share/man/man1/gt-loccheck.1.gz
/usr/share/man/man1/gt-ltrclustering.1.gz
/usr/share/man/man1/gt-ltrdigest.1.gz
/usr/share/man/man1/gt-ltrharvest.1.gz
/usr/share/man/man1/gt-matchtool.1.gz
/usr/share/man/man1/gt-matstat.1.gz
/usr/share/man/man1/gt-md5_to_id.1.gz
/usr/share/man/man1/gt-merge.1.gz
/usr/share/man/man1/gt-mergefeat.1.gz
/usr/share/man/man1/gt-mkfeatureindex.1.gz
/usr/share/man/man1/gt-mmapandread.1.gz
/usr/share/man/man1/gt-orffinder.1.gz
/usr/share/man/man1/gt-packedindex.1.gz
/usr/share/man/man1/gt-prebwt.1.gz
/usr/share/man/man1/gt-readjoiner.1.gz
/usr/share/man/man1/gt-readjoiner-assembly.1.gz
/usr/share/man/man1/gt-readjoiner-overlap.1.gz
/usr/share/man/man1/gt-readjoiner-prefilter.1.gz
/usr/share/man/man1/gt-repfind.1.gz
/usr/share/man/man1/gt-scriptfilter.1.gz
/usr/share/man/man1/gt-seed_extend.1.gz
/usr/share/man/man1/gt-select.1.gz
/usr/share/man/man1/gt-seq.1.gz
/usr/share/man/man1/gt-seqfilter.1.gz
/usr/share/man/man1/gt-seqids.1.gz
/usr/share/man/man1/gt-seqmutate.1.gz
/usr/share/man/man1/gt-seqorder.1.gz
/usr/share/man/man1/gt-seqstat.1.gz
/usr/share/man/man1/gt-seqtransform.1.gz
/usr/share/man/man1/gt-seqtranslate.1.gz
/usr/share/man/man1/gt-sequniq.1.gz
/usr/share/man/man1/gt-shredder.1.gz
/usr/share/man/man1/gt-shulengthdist.1.gz
/usr/share/man/man1/gt-simreads.1.gz
/usr/share/man/man1/gt-sketch.1.gz
/usr/share/man/man1/gt-sketch_page.1.gz
/usr/share/man/man1/gt-snpper.1.gz
/usr/share/man/man1/gt-speck.1.gz
/usr/share/man/man1/gt-splicesiteinfo.1.gz
/usr/share/man/man1/gt-splitfasta.1.gz
/usr/share/man/man1/gt-stat.1.gz
/usr/share/man/man1/gt-tagerator.1.gz
/usr/share/man/man1/gt-tallymer.1.gz
/usr/share/man/man1/gt-tallymer-mkindex.1.gz
/usr/share/man/man1/gt-tallymer-occratio.1.gz
/usr/share/man/man1/gt-tallymer-search.1.gz
/usr/share/man/man1/gt-tirvish.1.gz
/usr/share/man/man1/gt-uniq.1.gz
/usr/share/man/man1/gt-uniquesub.1.gz
/usr/share/man/man1/gt-wtree.1.gz

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Experimentar Debian 13 (Trixie) no navegador Construir uma imagem que inclui genometools

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.6.5+ds-2.2	trixie / main	amd64	Debian 13 · main · amd64	1.6 MiB	4.2 MiB	pool/main/g/genometools/genometools_1.6.5+ds-2.2_amd64.deb
1.6.5+ds-2.2	trixie / main	arm64	Debian 13 · main · arm64	1.4 MiB	4.2 MiB	pool/main/g/genometools/genometools_1.6.5+ds-2.2_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.6.5+ds-2.2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: fc9a991476f56ab1daadd8d01b54c0c07c8d1e2dc52a568bcd8445af8819ace3

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'fc9a991476f56ab1daadd8d01b54c0c07c8d1e2dc52a568bcd8445af8819ace3' 'genometools_1.6.5+ds-2.2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1.6.5+ds-2.2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 8eae8270ab8152cfff776e2791fba9213358742dbc3f60370f6e48af60cf465b

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '8eae8270ab8152cfff776e2791fba9213358742dbc3f60370f6e48af60cf465b' 'genometools_1.6.5+ds-2.2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified