Debian 13 (Trixie) native package

gubbins

phylogenetic analysis of genome sequences

Packages / Debian 13 (Trixie) / science / gubbins

Package: gubbins

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [sanger-pathogens.github.io]

phylogenetic analysis of genome sequences

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Caminhos de arquivo do pacote (44)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/run_gubbins
/usr/lib/gubbins/gubbins
/usr/lib/x86_64-linux-gnu/libgubbins.so
/usr/lib/x86_64-linux-gnu/libgubbins.so.0
/usr/lib/x86_64-linux-gnu/libgubbins.so.0.0.1
/usr/share/doc/gubbins/changelog.Debian.gz
/usr/share/doc/gubbins/changelog.gz
/usr/share/doc/gubbins/copyright
/usr/share/gubbins/count_recombinations_per_gene.py
/usr/share/gubbins/extract_gubbins_clade.py
/usr/share/gubbins/extract_recombinant_sequences.py
/usr/share/gubbins/generate_files_for_clade_analysis.py
/usr/share/gubbins/generate_ska_alignment.py
/usr/share/gubbins/gubbins-3.4.egg-info/dependency_links.txt
/usr/share/gubbins/gubbins-3.4.egg-info/entry_points.txt
/usr/share/gubbins/gubbins-3.4.egg-info/PKG-INFO
/usr/share/gubbins/gubbins-3.4.egg-info/requires.txt
/usr/share/gubbins/gubbins-3.4.egg-info/top_level.txt
/usr/share/gubbins/gubbins_alignment_checker.py
/usr/share/gubbins/gubbins/common.py
/usr/share/gubbins/gubbins/__init__.py
/usr/share/gubbins/gubbins/PreProcessFasta.py
/usr/share/gubbins/gubbins/pyjar.py
/usr/share/gubbins/gubbins/run_gubbins.py
/usr/share/gubbins/gubbins/tests/__init__.py
/usr/share/gubbins/gubbins/tests/test_alignment_python_methods.py
/usr/share/gubbins/gubbins/tests/test_converging_recombinations.py
/usr/share/gubbins/gubbins/tests/test_dependencies.py
/usr/share/gubbins/gubbins/tests/test_pre_process_fasta.py
/usr/share/gubbins/gubbins/tests/test_python_scripts.py
/usr/share/gubbins/gubbins/tests/test_treebuilders.py
/usr/share/gubbins/gubbins/tests/test_tree_methods.py
/usr/share/gubbins/gubbins/tests/test_utils.py
/usr/share/gubbins/gubbins/tests/test_validate_fasta_input.py
/usr/share/gubbins/gubbins/tests/test_validate_starting_tree.py
/usr/share/gubbins/gubbins/treebuilders.py
/usr/share/gubbins/gubbins/utils.py
/usr/share/gubbins/gubbins/ValidateFastaAlignment.py
/usr/share/gubbins/mask_gubbins_aln.py
/usr/share/gubbins/plot_gubbins.R
/usr/share/gubbins/run_gubbins.py
/usr/share/lintian/overrides/gubbins
/usr/share/man/man1/run_gubbins.1.gz
/usr/share/python3/runtime.d/gubbins.rtupdate

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Experimentar Debian 13 (Trixie) no navegador Construir uma imagem que inclui gubbins

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified