Debian 13 (Trixie) native package

hinge

long read genome assembler based on hinging

Packages / Debian 13 (Trixie) / science / hinge

[Source: hinge]

Package: hinge

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

long read genome assembler based on hinging

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Caminhos de arquivo do pacote (76)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/hinge
/usr/lib/hinge/add_groundtruth_json.py
/usr/lib/hinge/add_groundtruth.py
/usr/lib/hinge/clip_ends.py
/usr/lib/hinge/compute_n50_from_draft.py
/usr/lib/hinge/condense_graph_and_annotate.py
/usr/lib/hinge/condense_graph_annotate_clip_ends.py
/usr/lib/hinge/condense_graph_create_gfa_compute_n50.py
/usr/lib/hinge/condense_graph.py
/usr/lib/hinge/condense_graph_with_gt.py
/usr/lib/hinge/connected.py
/usr/lib/hinge/consensus
/usr/lib/hinge/correct_head.py
/usr/lib/hinge/create_bandage_file.py
/usr/lib/hinge/create_hgraph_nogt.py
/usr/lib/hinge/create_hgraph.py
/usr/lib/hinge/download_NCTC_pipeline.py
/usr/lib/hinge/draft_assembly
/usr/lib/hinge/draft_assembly_not_perfect.py
/usr/lib/hinge/draft_assembly.py
/usr/lib/hinge/draw2_pileup.py
/usr/lib/hinge/draw2_pileup_region.py
/usr/lib/hinge/draw2_pileup_w_repeat.py
/usr/lib/hinge/draw2.py
/usr/lib/hinge/draw_pileup_region_find_bridges.py
/usr/lib/hinge/draw_pileup_region.py
/usr/lib/hinge/fasta_to_fastq.py
/usr/lib/hinge/get_consensus_gfa.py
/usr/lib/hinge/get_draft_annotation.py
/usr/lib/hinge/get_draft_path_norevcomp.py
/usr/lib/hinge/get_draft_path.py
/usr/lib/hinge/get_maximal_reads
/usr/lib/hinge/get_NCTC_json.py
/usr/lib/hinge/get_single_strand.py
/usr/lib/hinge/hinging
/usr/lib/hinge/interface_utils.py
/usr/lib/hinge/longest_path.py
/usr/lib/hinge/merge_hinges.py
/usr/lib/hinge/parallel_draw_large.sh
/usr/lib/hinge/parallel_draw.sh
/usr/lib/hinge/parse_alignment.py
/usr/lib/hinge/parse.py
/usr/lib/hinge/parse_qv.py
/usr/lib/hinge/parse_read.py
/usr/lib/hinge/pileup.ipynb
/usr/lib/hinge/pipeline_consensus_norevcomp.py
/usr/lib/hinge/pipeline_consensus.py
/usr/lib/hinge/pipeline_nctc.py
/usr/lib/hinge/pruning_and_clipping_nanopore.py
/usr/lib/hinge/pruning_and_clipping.py
/usr/lib/hinge/random_condensation.py
/usr/lib/hinge/Reads_filter
/usr/lib/hinge/repeat_annotate_reads.py
/usr/lib/hinge/run_mapping2.py
/usr/lib/hinge/run_mapping3.py
/usr/lib/hinge/run_mapping.py
/usr/lib/hinge/run_parse_alignment.py
/usr/lib/hinge/run_parse_read.py
/usr/lib/hinge/split_las.py
/usr/lib/hinge/unitig.py
/usr/lib/hinge/Visualise_graph.py
/usr/share/doc/hinge/changelog.Debian.amd64.gz
/usr/share/doc/hinge/changelog.Debian.arm64.gz
/usr/share/doc/hinge/changelog.Debian.gz
/usr/share/doc/hinge/copyright
/usr/share/doc/hinge/examples/demo/ecoli_demo/run_norevcomp.sh
/usr/share/doc/hinge/examples/demo/ecoli_demo/run.sh
/usr/share/doc/hinge/examples/demo/ecoli_nanopore/run.sh
/usr/share/doc/hinge/examples/demo/ecoli_P4_demo/run.sh
/usr/share/doc/hinge/examples/demo/NCTC9657_demo/run.sh
/usr/share/doc/hinge/examples/demo/yeast_W303_demo/nominal.ini
/usr/share/doc/hinge/examples/demo/yeast_W303_demo/run.sh
/usr/share/doc/hinge/examples/utils/nominal.ini
/usr/share/doc/hinge/parameter_description.md.gz
/usr/share/doc/hinge/README.md.gz
/usr/share/man/man1/hinge.1.gz

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Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified