Linux workstation

Debian 13 (Trixie) native package

pbbamtools

processing Pacific Biosciences binary alignment/map files

Packages / Debian 13 (Trixie) / science / pbbamtools

[Source: pbbam]

Package: pbbamtools (2.4.0+dfsg-1+b4)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [pbbam.readthedocs.org]

Similar packages:

  • [libpbbam2.4.0]

    Pacific Biosciences binary alignment/map (BAM) library

  • [libpbbam-dev]

    Pacific Biosciences binary alignment/map (BAM) library (headers)

processing Pacific Biosciences binary alignment/map files

Other Packages Related to pbbamtools:

  • dep: [libc6] (>= 2.34)

    GNU C Library: Shared libraries

  • dep: [libgcc-s1] (>= 3.0)

    GCC support library

  • dep: [libhts3t64] (>= 1.17)

    C library for high-throughput sequencing data formats

  • dep: [libpbbam2.4.0] (= 2.4.0+dfsg-1+b4)

    Pacific Biosciences binary alignment/map (BAM) library

  • dep: [libpbcopper2.3.0] (>= 2.3.0+dfsg)

    data structures, algorithms, and utilities for C++ applications

  • dep: [libstdc++6] (>= 13.1)

    GNU Standard C++ Library v3

  • rec: [samtools]

    processing sequence alignments in SAM, BAM and CRAM formats

Download pbbamtools

ArchitecturePackage SizeInstalled SizeFiles
amd64134 KiB479 KiB[list of files]
arm64117 KiB619 KiB[list of files]

Caminhos de arquivo do pacote (12)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/bam2sam
  • /usr/bin/ccs-kinetics-bystrandify
  • /usr/bin/pbbamify
  • /usr/bin/pbindex
  • /usr/bin/pbindexdump
  • /usr/bin/pbmerge
  • /usr/share/doc/pbbamtools/changelog.Debian.amd64.gz
  • /usr/share/doc/pbbamtools/changelog.Debian.arm64.gz
  • /usr/share/doc/pbbamtools/changelog.Debian.gz
  • /usr/share/doc/pbbamtools/changelog.gz
  • /usr/share/doc/pbbamtools/copyright
  • /usr/share/doc/pbbamtools/TODO.Debian

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Experimentar Debian 13 (Trixie) no navegadorConstruir uma imagem que inclui pbbamtools

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
2.4.0+dfsg-1+b4trixie / mainamd64Debian 13 · main · amd64134 KiB479 KiBpool/main/p/pbbam/pbbamtools_2.4.0+dfsg-1+b4_amd64.deb
2.4.0+dfsg-1+b4trixie / mainarm64Debian 13 · main · arm64117 KiB619 KiBpool/main/p/pbbam/pbbamtools_2.4.0+dfsg-1+b4_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.4.0+dfsg-1+b4 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: f381a8af73e1b1bee6a3dcca739cfee12c3e4ed5918afab9ae00a9227fc074bf

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' 'f381a8af73e1b1bee6a3dcca739cfee12c3e4ed5918afab9ae00a9227fc074bf' 'pbbamtools_2.4.0+dfsg-1+b4_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

2.4.0+dfsg-1+b4 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 3da7a62e11a0ed7ed2d3e44f3e61da1ab42fb4a6f638b7dc925a989c2f21d9d6

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '3da7a62e11a0ed7ed2d3e44f3e61da1ab42fb4a6f638b7dc925a989c2f21d9d6' 'pbbamtools_2.4.0+dfsg-1+b4_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

pbbamtools Package for Debian 13 (Trixie) | OpenFactory