Debian 13 (Trixie) native package

python3-pairtools

Framework to process sequencing data from a Hi-C experiment

Packages / Debian 13 (Trixie) / python / python3-pairtools

[Source: pairtools]

Package: python3-pairtools

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Similar packages:

[python3-pairtools-examples]
Process sequencing data from a Hi-C experiment (examples)

Framework to process sequencing data from a Hi-C experiment

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Caminhos de arquivo do pacote (55)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/pairtools
/usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/entry_points.txt
/usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/INSTALLER
/usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/METADATA
/usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/top_level.txt
/usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/WHEEL
/usr/lib/python3/dist-packages/pairtools/cli/dedup.py
/usr/lib/python3/dist-packages/pairtools/cli/filterbycov.py
/usr/lib/python3/dist-packages/pairtools/cli/flip.py
/usr/lib/python3/dist-packages/pairtools/cli/header.py
/usr/lib/python3/dist-packages/pairtools/cli/__init__.py
/usr/lib/python3/dist-packages/pairtools/cli/markasdup.py
/usr/lib/python3/dist-packages/pairtools/cli/merge.py
/usr/lib/python3/dist-packages/pairtools/cli/parse2.py
/usr/lib/python3/dist-packages/pairtools/cli/parse.py
/usr/lib/python3/dist-packages/pairtools/cli/phase.py
/usr/lib/python3/dist-packages/pairtools/cli/restrict.py
/usr/lib/python3/dist-packages/pairtools/cli/sample.py
/usr/lib/python3/dist-packages/pairtools/cli/scaling.py
/usr/lib/python3/dist-packages/pairtools/cli/select.py
/usr/lib/python3/dist-packages/pairtools/cli/sort.py
/usr/lib/python3/dist-packages/pairtools/cli/split.py
/usr/lib/python3/dist-packages/pairtools/cli/stats.py
/usr/lib/python3/dist-packages/pairtools/__init__.py
/usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.pyx
/usr/lib/python3/dist-packages/pairtools/lib/dedup.py
/usr/lib/python3/dist-packages/pairtools/lib/fileio.py
/usr/lib/python3/dist-packages/pairtools/lib/filterbycov.py
/usr/lib/python3/dist-packages/pairtools/lib/headerops.py
/usr/lib/python3/dist-packages/pairtools/lib/__init__.py
/usr/lib/python3/dist-packages/pairtools/lib/pairsam_format.py
/usr/lib/python3/dist-packages/pairtools/lib/pairsio.py
/usr/lib/python3/dist-packages/pairtools/lib/parse.py
/usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pxd
/usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pyx
/usr/lib/python3/dist-packages/pairtools/lib/phase.py
/usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-313-aarch64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-313-x86_64-linux-gnu.so
/usr/lib/python3/dist-packages/pairtools/lib/regions.pyx
/usr/lib/python3/dist-packages/pairtools/lib/restrict.py
/usr/lib/python3/dist-packages/pairtools/lib/scaling.py
/usr/lib/python3/dist-packages/pairtools/lib/select.py
/usr/lib/python3/dist-packages/pairtools/lib/stats.py
/usr/lib/python3/dist-packages/pairtools/_logging.py
/usr/lib/python3/dist-packages/pairtools/__main__.py
/usr/share/doc/python3-pairtools/changelog.Debian.amd64.gz
/usr/share/doc/python3-pairtools/changelog.Debian.arm64.gz
/usr/share/doc/python3-pairtools/changelog.Debian.gz
/usr/share/doc/python3-pairtools/changelog.gz
/usr/share/doc/python3-pairtools/copyright
/usr/share/doc/python3-pairtools/README.test

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Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

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Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified