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Debian 13 (Trixie) native package

python3-pairtools

Framework to process sequencing data from a Hi-C experiment

Packages / Debian 13 (Trixie) / python / python3-pairtools

[Source: pairtools]

Package: python3-pairtools (1.1.3-1+b1)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Similar packages:

Framework to process sequencing data from a Hi-C experiment

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  • dep: [libstdc++6] (>= 11)

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  • dep: [python3] (<< 3.14)

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  • dep: [python3-pandas]

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  • dep: [python3-pysam] (>= 0.20.0+ds-3~)

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Download python3-pairtools

ArchitecturePackage SizeInstalled SizeFiles
amd64202 KiB833 KiB[list of files]
arm64185 KiB925 KiB[list of files]

Caminhos de arquivo do pacote (55)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/pairtools
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/entry_points.txt
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/INSTALLER
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/METADATA
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/top_level.txt
  • /usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/WHEEL
  • /usr/lib/python3/dist-packages/pairtools/cli/dedup.py
  • /usr/lib/python3/dist-packages/pairtools/cli/filterbycov.py
  • /usr/lib/python3/dist-packages/pairtools/cli/flip.py
  • /usr/lib/python3/dist-packages/pairtools/cli/header.py
  • /usr/lib/python3/dist-packages/pairtools/cli/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/cli/markasdup.py
  • /usr/lib/python3/dist-packages/pairtools/cli/merge.py
  • /usr/lib/python3/dist-packages/pairtools/cli/parse2.py
  • /usr/lib/python3/dist-packages/pairtools/cli/parse.py
  • /usr/lib/python3/dist-packages/pairtools/cli/phase.py
  • /usr/lib/python3/dist-packages/pairtools/cli/restrict.py
  • /usr/lib/python3/dist-packages/pairtools/cli/sample.py
  • /usr/lib/python3/dist-packages/pairtools/cli/scaling.py
  • /usr/lib/python3/dist-packages/pairtools/cli/select.py
  • /usr/lib/python3/dist-packages/pairtools/cli/sort.py
  • /usr/lib/python3/dist-packages/pairtools/cli/split.py
  • /usr/lib/python3/dist-packages/pairtools/cli/stats.py
  • /usr/lib/python3/dist-packages/pairtools/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-313-aarch64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/dedup.py
  • /usr/lib/python3/dist-packages/pairtools/lib/fileio.py
  • /usr/lib/python3/dist-packages/pairtools/lib/filterbycov.py
  • /usr/lib/python3/dist-packages/pairtools/lib/headerops.py
  • /usr/lib/python3/dist-packages/pairtools/lib/__init__.py
  • /usr/lib/python3/dist-packages/pairtools/lib/pairsam_format.py
  • /usr/lib/python3/dist-packages/pairtools/lib/pairsio.py
  • /usr/lib/python3/dist-packages/pairtools/lib/parse.py
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-313-aarch64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pxd
  • /usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/phase.py
  • /usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-313-aarch64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-313-x86_64-linux-gnu.so
  • /usr/lib/python3/dist-packages/pairtools/lib/regions.pyx
  • /usr/lib/python3/dist-packages/pairtools/lib/restrict.py
  • /usr/lib/python3/dist-packages/pairtools/lib/scaling.py
  • /usr/lib/python3/dist-packages/pairtools/lib/select.py
  • /usr/lib/python3/dist-packages/pairtools/lib/stats.py
  • /usr/lib/python3/dist-packages/pairtools/_logging.py
  • /usr/lib/python3/dist-packages/pairtools/__main__.py
  • /usr/share/doc/python3-pairtools/changelog.Debian.amd64.gz
  • /usr/share/doc/python3-pairtools/changelog.Debian.arm64.gz
  • /usr/share/doc/python3-pairtools/changelog.Debian.gz
  • /usr/share/doc/python3-pairtools/changelog.gz
  • /usr/share/doc/python3-pairtools/copyright
  • /usr/share/doc/python3-pairtools/README.test

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este pacote

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Experimentar Debian 13 (Trixie) no navegadorConstruir uma imagem que inclui python3-pairtools

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.1.3-1+b1trixie / mainamd64Debian 13 · main · amd64202 KiB833 KiBpool/main/p/pairtools/python3-pairtools_1.1.3-1+b1_amd64.deb
1.1.3-1+b1trixie / mainarm64Debian 13 · main · arm64185 KiB925 KiBpool/main/p/pairtools/python3-pairtools_1.1.3-1+b1_arm64.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.1.3-1+b1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 413bfb5ff113c99270df2798fb8b32782b7627157892fc057e223d414550e9ce

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '413bfb5ff113c99270df2798fb8b32782b7627157892fc057e223d414550e9ce' 'python3-pairtools_1.1.3-1+b1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1.1.3-1+b1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 30df7f390d969bfe383e6de2310e0be5834f9a06bef60282d5212fe2656fcacd

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '30df7f390d969bfe383e6de2310e0be5834f9a06bef60282d5212fe2656fcacd' 'python3-pairtools_1.1.3-1+b1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Debian 13 (Trixie) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

python3-pairtools Package for Debian 13 (Trixie) | OpenFactory