Linux workstation

Debian 13 (Trixie) native package

r-bioc-phyloseq

GNU R handling and analysis of high-throughput microbiome census data

Packages / Debian 13 (Trixie) / gnu-r / r-bioc-phyloseq

Package: r-bioc-phyloseq (1.50.0+dfsg-2)

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

GNU R handling and analysis of high-throughput microbiome census data

Other Packages Related to r-bioc-phyloseq:

  • dep: r-api-4.0

    Package not available

  • dep: r-api-bioc-3.20

    Package not available

  • dep: [r-cran-ade4] (>= 1.7-4)

    GNU R analysis of ecological data

  • dep: [r-cran-ape] (>= 5.0)

    GNU R package for Analyses of Phylogenetics and Evolution

  • dep: [r-bioc-biobase] (>= 2.36.2)

    base functions for Bioconductor

  • dep: [r-bioc-biocgenerics] (>= 0.22.0)

    generic functions for Bioconductor

  • dep: [r-bioc-biomformat] (>= 1.0.0)

    GNU R interface package for the BIOM file format

  • dep: [r-bioc-biostrings] (>= 2.40.0)

    GNU R string objects representing biological sequences

  • dep: [r-cran-cluster] (>= 2.0.4)

    GNU R package for cluster analysis by Rousseeuw et al

  • dep: [r-cran-data.table] (>= 1.10.4)

    GNU R extension of Data.frame

  • dep: [r-cran-foreach] (>= 1.4.3)

    GNU R foreach looping support

  • dep: [r-cran-ggplot2] (>= 2.1.0)

    implementation of the Grammar of Graphics

  • dep: [r-cran-igraph] (>= 1.0.1)

    GNU R network analysis and visualization

  • dep: [r-bioc-multtest] (>= 2.28.0)

    Bioconductor resampling-based multiple hypothesis testing

  • dep: [r-cran-plyr] (>= 1.8.3)

    tools for splitting, applying and combining data

  • dep: [r-cran-reshape2] (>= 1.4.1)

    Flexibly reshape data: a reboot of the reshape package

  • dep: [r-cran-scales] (>= 0.4.0)

    Scale functions for visualization

  • dep: [r-cran-vegan] (>= 2.5)

    Community Ecology Package for R

  • sug: [r-bioc-biocstyle] (>= 2.4)

    standard styles for vignettes and other Bioconductor documents

  • sug: [r-bioc-deseq2] (>= 1.16.1)

    R package for RNA-Seq Differential Expression Analysis

  • sug: [r-bioc-genefilter] (>= 1.58)

    methods for filtering genes from microarray experiments

  • sug: [r-cran-knitr] (>= 1.16)

    GNU R package for dynamic report generation using Literate Programming

  • sug: [r-cran-magrittr] (>= 1.5)

    GNU R forward-pipe operator

  • sug: [r-bioc-metagenomeseq] (>= 1.14)

    GNU R statistical analysis for sparse high-throughput sequencing

  • sug: [r-cran-rmarkdown] (>= 1.6)

    convert R markdown documents into a variety of formats

  • sug: [r-cran-testthat] (>= 1.0.2)

    GNU R testsuite

Download r-bioc-phyloseq

ArchitecturePackage SizeInstalled SizeFiles
all2.2 MiB3.1 MiB[list of files]

Caminhos de arquivo do pacote (0)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

No package-associated file paths were observed for the displayed build metadata.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.50.0+dfsg-2trixie / mainallDebian 13 · main · amd642.2 MiB3.1 MiBpool/main/r/r-bioc-phyloseq/r-bioc-phyloseq_1.50.0+dfsg-2_all.deb
1.50.0+dfsg-2trixie / mainallDebian 13 · main · arm642.2 MiB3.1 MiBpool/main/r/r-bioc-phyloseq/r-bioc-phyloseq_1.50.0+dfsg-2_all.deb

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.50.0+dfsg-2 / allObserved Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 2806dacca7b4be8488bb2ae0a0f24d85e39e39e24cc634437fb56ba4f95d27a6

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '2806dacca7b4be8488bb2ae0a0f24d85e39e39e24cc634437fb56ba4f95d27a6' 'r-bioc-phyloseq_1.50.0+dfsg-2_all.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

1.50.0+dfsg-2 / allObserved Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 2806dacca7b4be8488bb2ae0a0f24d85e39e39e24cc634437fb56ba4f95d27a6

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '2806dacca7b4be8488bb2ae0a0f24d85e39e39e24cc634437fb56ba4f95d27a6' 'r-bioc-phyloseq_1.50.0+dfsg-2_all.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
0/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 80/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified

r-bioc-phyloseq Package for Debian 13 (Trixie) | OpenFactory