Linux workstation

Debian 13 (Trixie) native package

seer

genomic sequence element (kmer) enrichment analysis

Packages / Debian 13 (Trixie) / science / seer

[Source: seer]

Package: seer

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

genomic sequence element (kmer) enrichment analysis

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Caminhos de arquivo do pacote (64)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/blastn_to_phandango
  • /usr/bin/blast_top_hits
  • /usr/bin/combineKmers
  • /usr/bin/filter_seer
  • /usr/bin/hits_to_fastq
  • /usr/bin/kmds
  • /usr/bin/map_back
  • /usr/bin/mapping_to_phandango
  • /usr/bin/mash2matrix
  • /usr/bin/reformat_output
  • /usr/bin/R_mds
  • /usr/bin/seer
  • /usr/share/doc/seer/changelog.Debian.amd64.gz
  • /usr/share/doc/seer/changelog.Debian.arm64.gz
  • /usr/share/doc/seer/changelog.Debian.gz
  • /usr/share/doc/seer/copyright
  • /usr/share/doc/seer/examples/6259_5_16.fa
  • /usr/share/doc/seer/examples/all_structure_new
  • /usr/share/doc/seer/examples/all_structure_new.samples
  • /usr/share/doc/seer/examples/assembly_locations.txt
  • /usr/share/doc/seer/examples/covariates.txt
  • /usr/share/doc/seer/examples/example_kmers.gz
  • /usr/share/doc/seer/examples/example.pheno
  • /usr/share/doc/seer/examples/example_wrapper.py
  • /usr/share/doc/seer/examples/filter_in.txt
  • /usr/share/doc/seer/examples/generate_test.pl
  • /usr/share/doc/seer/examples/Makefile
  • /usr/share/doc/seer/examples/map_in.txt
  • /usr/share/doc/seer/examples/run_test.pl
  • /usr/share/doc/seer/examples/subset.cont.pheno
  • /usr/share/doc/seer/examples/subset.pheno
  • /usr/share/doc/seer/examples/test1.e.txt
  • /usr/share/doc/seer/examples/test1.o.txt
  • /usr/share/doc/seer/examples/test2.e.txt
  • /usr/share/doc/seer/examples/test2.o.txt
  • /usr/share/doc/seer/examples/test3.e.txt
  • /usr/share/doc/seer/examples/test3.o.txt
  • /usr/share/doc/seer/examples/test4.e.txt
  • /usr/share/doc/seer/examples/test4.o.txt
  • /usr/share/doc/seer/examples/test5.e.txt
  • /usr/share/doc/seer/examples/test5.o.txt
  • /usr/share/doc/seer/examples/test6.e.txt
  • /usr/share/doc/seer/examples/test6.o.txt
  • /usr/share/doc/seer/examples/test7.e.txt
  • /usr/share/doc/seer/examples/test7.o.txt
  • /usr/share/doc/seer/examples/test8.e.txt
  • /usr/share/doc/seer/examples/test8.o.txt
  • /usr/share/doc/seer/examples/tests_passed
  • /usr/share/doc/seer/README.Debian
  • /usr/share/doc/seer/README.source
  • /usr/share/doc/seer/README.test
  • /usr/share/doc/seer/run-unit-test
  • /usr/share/man/man1/blastn_to_phandango.1.gz
  • /usr/share/man/man1/blast_top_hits.1.gz
  • /usr/share/man/man1/combineKmers.1.gz
  • /usr/share/man/man1/filter_seer.1.gz
  • /usr/share/man/man1/hits_to_fastq.1.gz
  • /usr/share/man/man1/kmds.1.gz
  • /usr/share/man/man1/map_back.1.gz
  • /usr/share/man/man1/mapping_to_phandango.1.gz
  • /usr/share/man/man1/mash2matrix.1.gz
  • /usr/share/man/man1/reformat_output.1.gz
  • /usr/share/man/man1/R_mds.1.gz
  • /usr/share/man/man1/seer.1.gz

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

Nenhum registro publicado corresponde a este filtro de suite e arquitetura.

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified

  • Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
    Result: match verified