Fedora 44 native package

glimmer

System for finding genes in microbial DNA

Packages / Fedora 44 / Unspecified / glimmer

[Source: glimmer]

Package: glimmer (3.02b-31.fc44)

External Resources:

Homepage: [www.cbcb.umd.edu]

System for finding genes in microbial DNA

Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses. Glimmer (Gene Locator and Interpolated Markov ModelER) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA.

Other Packages Related to glimmer:

dep: /usr/bin/awk
Package not available
dep: /usr/bin/csh
Package not available
dep: [elph]
Tool to find motifs in a set of DNA or protein sequences
dep: ld-linux-aarch64.so.1()(64bit)
Package not available
dep: ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
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dep: libgcc_s.so.1()(64bit)
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dep: libgcc_s.so.1(GCC_3.0)(64bit)
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dep: libgcc_s.so.1(GCC_3.3.1)(64bit)
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dep: libm.so.6()(64bit)
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dep: libm.so.6(GLIBC_2.17)(64bit)
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dep: libm.so.6(GLIBC_2.27)(64bit)
Package not available
dep: libm.so.6(GLIBC_2.29)(64bit)
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dep: libstdc++.so.6()(64bit)
Package not available
dep: libstdc++.so.6(CXXABI_1.3)(64bit)
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dep: libstdc++.so.6(CXXABI_1.3.8)(64bit)
Package not available
dep: libstdc++.so.6(CXXABI_1.3.9)(64bit)
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dep: libstdc++.so.6(GLIBCXX_3.4)(64bit)
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dep: libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
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dep: libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
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dep: libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
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dep: libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
Package not available
dep: rtld(GNU_HASH)
Package not available
dep: libc.so.6(GLIBC_2.38)(64bit)
Package not available

Download glimmer

Architecture	Package Size	Installed Size	Files
aarch64	2.7 MiB	12 MiB	[list of files]
x86_64	2.7 MiB	12 MiB	[list of files]

Caminhos de arquivo do pacote (104)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/g3-from-scratch.csh
/usr/bin/g3-from-training.csh
/usr/bin/g3-iterated.csh
/usr/bin/glimmer3
/usr/lib/.build-id
/usr/lib/.build-id/04
/usr/lib/.build-id/04/13e83b8190aa6f2fe47c1ed43227d0898632b9
/usr/lib/.build-id/08
/usr/lib/.build-id/08/055f7764c919d3f8cf12e9a9c48d2c6cf3f31e
/usr/lib/.build-id/0a
/usr/lib/.build-id/0a/0452f0e2f7e850f0bf9a2dea5f5f3d6bddc43a
/usr/lib/.build-id/24
/usr/lib/.build-id/24/b717a5c0c2888d5ec6b8356b30bba92a0b7e5f
/usr/lib/.build-id/26
/usr/lib/.build-id/26/d6e8836e94b4b8e2796800561e2d05daa0a8af
/usr/lib/.build-id/40
/usr/lib/.build-id/40/e587680d3c157100d6456a3f8916977739e164
/usr/lib/.build-id/42
/usr/lib/.build-id/42/0691ff3be071bb158ef132469e050fbeccd92e
/usr/lib/.build-id/47
/usr/lib/.build-id/47/dc8b46666d5474d2803f014f0413f87fa6b8e6
/usr/lib/.build-id/69
/usr/lib/.build-id/69/7feda360e78e2fdf66145b751a0d8c81819f7f
/usr/lib/.build-id/6e
/usr/lib/.build-id/6e/bf32230fd54d0001a6fb8cdae4282b8cbfefa0
/usr/lib/.build-id/76
/usr/lib/.build-id/76/3d3e3ebd804cd3ea07d80ae77245e63c1fa06a
/usr/lib/.build-id/77
/usr/lib/.build-id/77/9dffdb09d984ca6b3717b84228bf1cd83a5fc8
/usr/lib/.build-id/7f
/usr/lib/.build-id/7f/654acdb5670fb612c9dc21b8626725dfdc7cf1
/usr/lib/.build-id/8c
/usr/lib/.build-id/8c/d09ed6e0f7de1fe707bc863474c8db05501705
/usr/lib/.build-id/a6
/usr/lib/.build-id/a6/2d4693fa10e0b87cf26c69e984d67ca1fe4aa2
/usr/lib/.build-id/a7
/usr/lib/.build-id/a7/6f49f10389b395c46e7714585218f343c54a8c
/usr/lib/.build-id/ad
/usr/lib/.build-id/ad/7e970ec18af684be5124645b0ff0eea9a7f858
/usr/lib/.build-id/b5
/usr/lib/.build-id/b5/168c1daf1eda939e796c88449f70018a62c7bc
/usr/lib/.build-id/c6
/usr/lib/.build-id/c6/2a3e135360c73136076476b44ce6d6f26bc693
/usr/lib/.build-id/c7
/usr/lib/.build-id/c7/8317193ab813bb2b83424d745dcfaead276a2b
/usr/lib/.build-id/c9
/usr/lib/.build-id/c9/0f395274d46fc9da2a6381a63eabc9c64b5225
/usr/lib/.build-id/da
/usr/lib/.build-id/da/f55e0a3ed6d77ac08e6bd5cb63aaae77577dc4
/usr/lib/.build-id/db
/usr/lib/.build-id/db/c411b51fdf79f3cecf8c206c0d113285001c82
/usr/lib/.build-id/de
/usr/lib/.build-id/de/79b30aba2ad9347dca4d51a0957eb4b19cb700
/usr/lib/.build-id/f0
/usr/lib/.build-id/f0/939327bff1d9a2319999bc9cd663ea9d92a6d8
/usr/lib/.build-id/fa
/usr/lib/.build-id/fa/03495fa308d392c00fae6d9f4ec2567724ed64
/usr/libexec/glimmer3
/usr/libexec/glimmer3/anomaly
/usr/libexec/glimmer3/build-fixed
/usr/libexec/glimmer3/build-icm
/usr/libexec/glimmer3/entropy-profile
/usr/libexec/glimmer3/entropy-score
/usr/libexec/glimmer3/extract
/usr/libexec/glimmer3/glimmer3
/usr/libexec/glimmer3/long-orfs
/usr/libexec/glimmer3/multi-extract
/usr/libexec/glimmer3/score-fixed
/usr/libexec/glimmer3/start-codon-distrib
/usr/libexec/glimmer3/uncovered
/usr/libexec/glimmer3/window-acgt
/usr/share/doc/glimmer
/usr/share/doc/glimmer/glim302notes.pdf
/usr/share/doc/glimmer/LICENSE
/usr/share/doc/glimmer/sample-run
/usr/share/doc/glimmer/sample-run/from-scratch.detail
/usr/share/doc/glimmer/sample-run/from-scratch.icm
/usr/share/doc/glimmer/sample-run/from-scratch.longorfs
/usr/share/doc/glimmer/sample-run/from-scratch.predict
/usr/share/doc/glimmer/sample-run/from-scratch.train
/usr/share/doc/glimmer/sample-run/from-training.detail
/usr/share/doc/glimmer/sample-run/from-training.icm
/usr/share/doc/glimmer/sample-run/from-training.motif
/usr/share/doc/glimmer/sample-run/from-training.predict
/usr/share/doc/glimmer/sample-run/from-training.train
/usr/share/doc/glimmer/sample-run/from-training.upstream
/usr/share/doc/glimmer/sample-run/iterated.coords
/usr/share/doc/glimmer/sample-run/iterated.detail
/usr/share/doc/glimmer/sample-run/iterated.icm
/usr/share/doc/glimmer/sample-run/iterated.longorfs
/usr/share/doc/glimmer/sample-run/iterated.motif
/usr/share/doc/glimmer/sample-run/iterated.predict
/usr/share/doc/glimmer/sample-run/iterated.run1.detail
/usr/share/doc/glimmer/sample-run/iterated.run1.predict
/usr/share/doc/glimmer/sample-run/iterated.train
/usr/share/doc/glimmer/sample-run/iterated.upstream
/usr/share/doc/glimmer/sample-run/tpall.fna
/usr/share/doc/glimmer/sample-run/tpall.nh
/usr/share/glimmer3
/usr/share/glimmer3/get-motif-counts.awk
/usr/share/glimmer3/glim-diff.awk
/usr/share/glimmer3/match-list-col.awk
/usr/share/glimmer3/not-acgt.awk
/usr/share/glimmer3/upstream-coords.awk

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

Usar este pacote

O OpenFactory pode iniciar este sistema operacional em uma máquina virtual do navegador, ou começar uma construção que inclui o nome nativo do pacote deste registro.

Experimentar Fedora 44 no navegador Construir uma imagem que inclui glimmer

Versões, suites e repositórios

Cada linha é metadado do índice de pacotes para uma versão, arquitetura, suite e repositório. Nomes, URLs e tamanhos vêm da fonte; um link é um ponto de obtenção mutável, não uma redistribuição da OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
3.02b-31.fc44	44 / everything	aarch64	Fedora 44 · Everything · aarch64	2.7 MiB	12 MiB	Packages/g/glimmer-3.02b-31.fc44.aarch64.rpm
3.02b-31.fc44	44 / everything	x86_64	Fedora 44 · Everything · x86_64	2.7 MiB	12 MiB	Packages/g/glimmer-3.02b-31.fc44.x86_64.rpm

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

Checksums e datas de observação

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

3.02b-31.fc44 / aarch64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 17d67a7b4d9bb09e59e91b4d919f7c33a404363c831d019a3615aba13c4aa47c

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '17d67a7b4d9bb09e59e91b4d919f7c33a404363c831d019a3615aba13c4aa47c' 'glimmer-3.02b-31.fc44.aarch64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee

3.02b-31.fc44 / x86_64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 1e4bfa352a77ad1989b27631833ec5501db01a9b2234b7b3ba31b889175bcc26

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '1e4bfa352a77ad1989b27631833ec5501db01a9b2234b7b3ba31b889175bcc26' 'glimmer-3.02b-31.fc44.x86_64.rpm' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Fedora 44 Everything x86_64 revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991

Completude do registro

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 5/5
Source package or maintainer: 10/10

Recorded total: 100/100

Field source: Fedora 44 Everything aarch64 revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee, Fedora 44 Everything x86_64 revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Fontes e proveniência

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Fedora 44 Everything aarch64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision 44-everything-aarch64:ad124f8125666e9059d7a8180427bdaea80f6286f71140457e5c7edd95883eee
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://mirrors.fedoraproject.org/metalink?repo=fedora-44&arch=aarch64
Signed-object SHA-256
236514c32119ab3c85b81fbb9e5e9d92b07aeba0d19d64c9b4fc9117a1863769
Signer fingerprint
Not recorded
Keyring revision
RPM-GPG-KEY-fedora-44-primary
SHA-256 93642aec521a1e5e96dd715f7ae0ec0850ebc9de09a94ce03cae5263f26cc18a
Tool and policy
1
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: Not recorded
Expected SHA-256: Not recorded
Observed SHA-256: Not recorded
Result: match verified
Fedora 44 Everything x86_64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision 44-everything-x86_64:da3845427d188097f6fd71b417a039bdfb8efefc4f38ca44b5cbb94f95a18991
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://mirrors.fedoraproject.org/metalink?repo=fedora-44&arch=x86_64
Signed-object SHA-256
1300b99ac5d04b5561ad901320c8bd59ed1553f4971c3ce2ca48c40242c66676
Signer fingerprint
Not recorded
Keyring revision
RPM-GPG-KEY-fedora-44-primary
SHA-256 93642aec521a1e5e96dd715f7ae0ec0850ebc9de09a94ce03cae5263f26cc18a
Tool and policy
1
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: Not recorded
Expected SHA-256: Not recorded
Observed SHA-256: Not recorded
Result: match verified