Debian 13 (Trixie) native package

lumpy-sv

general probabilistic framework for structural variant discovery

Packages / Debian 13 (Trixie) / science / lumpy-sv

[Source: lumpy-sv]

Package: lumpy-sv

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [github.com]

Similar packages:

[lumpy-sv-examples]
general probabilistic framework for structural variant discovery (data)

general probabilistic framework for structural variant discovery

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Шляхи файлів пакета (32)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/etc/lumpy-sv/lumpyexpress.config
/usr/bin/lumpy
/usr/bin/lumpyexpress
/usr/bin/lumpy_filter
/usr/share/doc/lumpy-sv/changelog.Debian.amd64.gz
/usr/share/doc/lumpy-sv/changelog.Debian.arm64.gz
/usr/share/doc/lumpy-sv/changelog.Debian.gz
/usr/share/doc/lumpy-sv/copyright
/usr/share/doc/lumpy-sv/README.md.gz
/usr/share/lumpy-sv/scripts/bedpe_sort.py
/usr/share/lumpy-sv/scripts/check_sorting.py
/usr/share/lumpy-sv/scripts/cnvanator_to_bedpes.py
/usr/share/lumpy-sv/scripts/extract-sites.py
/usr/share/lumpy-sv/scripts/extractSplitReads_BwaMem
/usr/share/lumpy-sv/scripts/get_coverages.py
/usr/share/lumpy-sv/scripts/get_exclude_regions.py
/usr/share/lumpy-sv/scripts/l_bp.py
/usr/share/lumpy-sv/scripts/l_merge.py
/usr/share/lumpy-sv/scripts/l_sort.py
/usr/share/lumpy-sv/scripts/lumpyexpress
/usr/share/lumpy-sv/scripts/lumpyexpress.config
/usr/share/lumpy-sv/scripts/lumpy_smooth
/usr/share/lumpy-sv/scripts/pairend_distro.py
/usr/share/lumpy-sv/scripts/par-svtyper.sh
/usr/share/lumpy-sv/scripts/prob_bedpe_to_bedgraph.py
/usr/share/lumpy-sv/scripts/run_histo.sh
/usr/share/lumpy-sv/scripts/split_unmapped_to_fasta.pl
/usr/share/lumpy-sv/scripts/vcfToBedpe
/usr/share/man/man1/lumpy.1.gz
/usr/share/man/man1/lumpyexpress.1.gz
/usr/share/man/man1/lumpy_filter.1.gz
/usr/share/python3/runtime.d/lumpy-sv.rtupdate

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить lumpy-sv

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified