Debian 13 (Trixie) native package

sim4db

batch spliced alignment of cDNA sequences to a target genome

Packages / Debian 13 (Trixie) / science / sim4db

[Source: kmer]

Package: sim4db

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [kmer.sourceforge.net]

Similar packages:

[atac]
genome assembly-to-assembly comparison
[kmer-examples]
sample data for kmer suite of tools for DNA sequence analysis
[leaff]
biological sequence library utilities and applications
[libkmer-dev]
suite of tools for DNA sequence analysis (development lib)
[libmeryl-dev]
in- and out-of-core kmer counting and utilities (development lib)
[meryl]
in- and out-of-core kmer counting and utilities

batch spliced alignment of cDNA sequences to a target genome

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Шляхи файлів пакета (56)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/bin/cleanPolishes
/usr/bin/comparePolishes
/usr/bin/convertPolishes
/usr/bin/convertToAtac
/usr/bin/convertToExtent
/usr/bin/depthOfPolishes
/usr/bin/detectChimera
/usr/bin/filterPolishes
/usr/bin/fixPolishesIID
/usr/bin/headPolishes
/usr/bin/mappedCoverage
/usr/bin/mergePolishes
/usr/bin/parseSNP
/usr/bin/pickBestPolish
/usr/bin/pickUniquePolish
/usr/bin/plotCoverageVsIdentity
/usr/bin/realignPolishes
/usr/bin/removeDuplicate
/usr/bin/reportAlignmentDifferences
/usr/bin/sim4db
/usr/bin/sortPolishes
/usr/bin/summarizePolishes
/usr/bin/uniqPolishes
/usr/bin/vennPolishes
/usr/share/doc/sim4db/changelog.Debian.amd64.gz
/usr/share/doc/sim4db/changelog.Debian.arm64.gz
/usr/share/doc/sim4db/changelog.Debian.gz
/usr/share/doc/sim4db/copyright
/usr/share/doc/sim4db/README.sim4db.gz
/usr/share/doc/sim4db/README.test
/usr/share/doc/sim4db/sim4db-unit-test
/usr/share/man/man1/cleanPolishes.1.gz
/usr/share/man/man1/comparePolishes.1.gz
/usr/share/man/man1/convertPolishes.1.gz
/usr/share/man/man1/convertToAtac.1.gz
/usr/share/man/man1/convertToExtent.1.gz
/usr/share/man/man1/depthOfPolishes.1.gz
/usr/share/man/man1/detectChimera.1.gz
/usr/share/man/man1/filterPolishes.1.gz
/usr/share/man/man1/fixPolishesIID.1.gz
/usr/share/man/man1/headPolishes.1.gz
/usr/share/man/man1/mappedCoverage.1.gz
/usr/share/man/man1/mergePolishes.1.gz
/usr/share/man/man1/parseSNP.1.gz
/usr/share/man/man1/pickBestPolish.1.gz
/usr/share/man/man1/pickUniquePolish.1.gz
/usr/share/man/man1/plotCoverageVsIdentity.1.gz
/usr/share/man/man1/realignPolishes.1.gz
/usr/share/man/man1/removeDuplicate.1.gz
/usr/share/man/man1/reportAlignmentDifferences.1.gz
/usr/share/man/man1/sim4db.1.gz
/usr/share/man/man1/sim4dbutils.1.gz
/usr/share/man/man1/sortPolishes.1.gz
/usr/share/man/man1/summarizePolishes.1.gz
/usr/share/man/man1/uniqPolishes.1.gz
/usr/share/man/man1/vennPolishes.1.gz

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить sim4db

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Жоден опублікований запис не відповідає цьому фільтру набору та архітектури.

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified