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Upstream software project

python-bioframe

Pandas utilities for tab-delimited and other genomic data files

About python-bioframe

Pandas utilities for tab-delimited and other genomic data files

This project links 12 native package records across 6 recorded operating-system releases. Compare the retained versions and architectures below, then open the package for your own release.

These are catalog observations, not a guarantee of installation, compatibility, or upstream support.

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Project pictures and package coverage

python-bioframe repository preview from GitHub
Project repository preview, supplied by GitHub. Open source repository
Alpine Linux 3.21: 3 package records; Alpine Linux 3.22: 3 package records; Alpine Linux 3.23: 3 package records; Debian 12 (Bookworm): 1 package records; Debian 13 (Trixie): 1 package records; Fedora 43: 1 package records. Catalog coverage diagram, not an application screenshot.python-bioframe: recorded package coverageAlpine Linux 3.213 recordsAlpine Linux 3.223 recordsAlpine Linux 3.233 recordsDebian 12 (Bookworm)1 recordsDebian 13 (Trixie)1 recordsFedora 431 records
OpenFactory diagram of linked package records. It is not an application screenshot.

Project identity

Project
python-bioframe
Publisher
Not authoritatively mapped
Native package records
12
Operating systems
alpine-linux-3-21, alpine-linux-3-22, alpine-linux-3-23, debian-12, debian-13, fedora-43
License expression
MIT
Metadata completeness
70/100 (not a software quality rating)
Homepage
Visit upstream site
Source repository
Open source repository

Source-reported description

The fullest retained description is shown with its source. Distribution packaging descriptions may include downstream details.

Bioframe enables flexible and scalable operations on genomic interval dataframes in Python. Bioframe is built directly on top of Pandas. Bioframe provides: - A variety of genomic interval operations that work directly on dataframes. - Operations for special classes of genomic intervals, including chromosome arms and fixed-size bins. - Conveniences for diverse tabular genomic data formats and loading genome assembly summary information. Bioframe is an Affiliated Project of NumFOCUS.

Description source

Packages by operating system

Compare recorded versions, then open a package for dependency, file, checksum, and repository evidence. Version strings are distribution-specific, not a ranking of newer software.

Alpine Linux 3.21

  1. py3-bioframe

    Alpine Linux 3.21 / source py3-bioframe

    0.7.2-r1

    Pandas utilities for tab-delimited and other genomic data files

    aarch64x86_64v3.21
  2. py3-bioframe-doc

    Alpine Linux 3.21 / source py3-bioframe

    0.7.2-r1

    Pandas utilities for tab-delimited and other genomic data files (documentation)

    aarch64x86_64v3.21
  3. py3-bioframe-pyc

    Alpine Linux 3.21 / source py3-bioframe

    0.7.2-r1

    Precompiled Python bytecode for py3-bioframe

    aarch64x86_64v3.21

Alpine Linux 3.22

  1. py3-bioframe

    Alpine Linux 3.22 / source py3-bioframe

    0.8.0-r0

    Pandas utilities for tab-delimited and other genomic data files

    aarch64x86_64v3.22
  2. py3-bioframe-doc

    Alpine Linux 3.22 / source py3-bioframe

    0.8.0-r0

    Pandas utilities for tab-delimited and other genomic data files (documentation)

    aarch64x86_64v3.22
  3. py3-bioframe-pyc

    Alpine Linux 3.22 / source py3-bioframe

    0.8.0-r0

    Precompiled Python bytecode for py3-bioframe

    aarch64x86_64v3.22

Alpine Linux 3.23

  1. py3-bioframe

    Alpine Linux 3.23 / source py3-bioframe

    0.8.0-r0

    Pandas utilities for tab-delimited and other genomic data files

    aarch64x86_64v3.23
  2. py3-bioframe-doc

    Alpine Linux 3.23 / source py3-bioframe

    0.8.0-r0

    Pandas utilities for tab-delimited and other genomic data files (documentation)

    aarch64x86_64v3.23
  3. py3-bioframe-pyc

    Alpine Linux 3.23 / source py3-bioframe

    0.8.0-r0

    Precompiled Python bytecode for py3-bioframe

    aarch64x86_64v3.23

Debian 12 (Bookworm)

  1. python3-bioframe

    Debian 12 (Bookworm) / science / source python-bioframe

    0.3.3-2

    library to enable flexible, scalable operations on genomic interval dataframes

    allbookworm

Debian 13 (Trixie)

  1. python3-bioframe

    Debian 13 (Trixie) / science / source python-bioframe

    0.4.1-2

    library to enable flexible, scalable operations on genomic interval dataframes

    alltrixie

Fedora 43

  1. python3-bioframe

    Fedora 43 / Unspecified / source python-bioframe

    0.8.0-7.fc43

    Operations and utilities for Genomic Interval Dataframes

    noarch43

Project resources and further reading

Mapping provenance

Only source-backed identity signals create public cross-OS links. A reviewer can later approve or dispute an inferred relationship without rewriting native package history.

No field-level source record is published yet.

python-bioframe Software and Packages | OpenFactory