Debian 12 (Bookworm) native package

libpbbam-dev

Pacific Biosciences binary alignment/map (BAM) library (headers)

Packages / Debian 12 (Bookworm) / libdevel / libpbbam-dev

[Source: pbbam]

Package: libpbbam-dev (2.1.0+dfsg-2)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [pbbam.readthedocs.org]

Similar packages:

[libpbbam2.1.0]
Pacific Biosciences binary alignment/map (BAM) library
[pbbamtools]
processing Pacific Biosciences binary alignment/map files

Pacific Biosciences binary alignment/map (BAM) library (headers)

Other Packages Related to libpbbam-dev:

dep: [libpbbam2.1.0] (= 2.1.0+dfsg-2)
Pacific Biosciences binary alignment/map (BAM) library
dep: [libhts-dev]
development files for the HTSlib
dep: [libssl-dev]
Secure Sockets Layer toolkit - development files

Download libpbbam-dev

Architecture	Package Size	Installed Size	Files
amd64	87 KiB	609 KiB	[list of files]
arm64	87 KiB	609 KiB	[list of files]

Package file paths (131)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

/usr/include/pbbam/Accuracy.h
/usr/include/pbbam/AlignmentPrinter.h
/usr/include/pbbam/BaiIndexCache.h
/usr/include/pbbam/BaiIndexedBamReader.h
/usr/include/pbbam/BamFile.h
/usr/include/pbbam/BamFileMerger.h
/usr/include/pbbam/BamHeader.h
/usr/include/pbbam/BamReader.h
/usr/include/pbbam/BamRecord.h
/usr/include/pbbam/BamRecordImpl.h
/usr/include/pbbam/BamRecordTag.h
/usr/include/pbbam/BamRecordView.h
/usr/include/pbbam/BamTagCodec.h
/usr/include/pbbam/BamWriter.h
/usr/include/pbbam/bed/BedReader.h
/usr/include/pbbam/bed/BedWriter.h
/usr/include/pbbam/BgzipFastaWriter.h
/usr/include/pbbam/BgzipFastqWriter.h
/usr/include/pbbam/BgzipWriter.h
/usr/include/pbbam/Cigar.h
/usr/include/pbbam/CigarOperation.h
/usr/include/pbbam/ClipType.h
/usr/include/pbbam/CollectionMetadata.h
/usr/include/pbbam/Compare.h
/usr/include/pbbam/CompositeBamReader.h
/usr/include/pbbam/CompositeFastaReader.h
/usr/include/pbbam/Config.h
/usr/include/pbbam/DataSet.h
/usr/include/pbbam/DataSetTypes.h
/usr/include/pbbam/DataSetXsd.h
/usr/include/pbbam/Deleters.h
/usr/include/pbbam/EntireFileQuery.h
/usr/include/pbbam/exception/BundleChemistryMappingException.h
/usr/include/pbbam/exception/InvalidSequencingChemistryException.h
/usr/include/pbbam/exception/ValidationException.h
/usr/include/pbbam/FaiIndex.h
/usr/include/pbbam/FastaCache.h
/usr/include/pbbam/FastaReader.h
/usr/include/pbbam/FastaSequence.h
/usr/include/pbbam/FastaSequenceQuery.h
/usr/include/pbbam/FastaWriter.h
/usr/include/pbbam/FastqReader.h
/usr/include/pbbam/FastqSequence.h
/usr/include/pbbam/FastqWriter.h
/usr/include/pbbam/FormatUtils.h
/usr/include/pbbam/FrameEncodingType.h
/usr/include/pbbam/Frames.h
/usr/include/pbbam/GenomicInterval.h
/usr/include/pbbam/GenomicIntervalQuery.h
/usr/include/pbbam/IFastaWriter.h
/usr/include/pbbam/IFastqWriter.h
/usr/include/pbbam/IndexedBamWriter.h
/usr/include/pbbam/IndexedFastaReader.h
/usr/include/pbbam/IndexedFastqReader.h
/usr/include/pbbam/internal/Compare.inl
/usr/include/pbbam/internal/CompositeBamReader.inl
/usr/include/pbbam/internal/DataSetBaseTypes.h
/usr/include/pbbam/internal/DataSetElement.h
/usr/include/pbbam/internal/DataSetElement.inl
/usr/include/pbbam/internal/PbiBasicTypes.inl
/usr/include/pbbam/internal/PbiFilter.inl
/usr/include/pbbam/internal/PbiFilterTypes.inl
/usr/include/pbbam/internal/QueryBase.h
/usr/include/pbbam/internal/QueryBase.inl
/usr/include/pbbam/Interval.h
/usr/include/pbbam/IRecordWriter.h
/usr/include/pbbam/LibraryInfo.h
/usr/include/pbbam/LocalContextFlags.h
/usr/include/pbbam/MD5.h
/usr/include/pbbam/MoveAppend.h
/usr/include/pbbam/Orientation.h
/usr/include/pbbam/PbbamVersion.h
/usr/include/pbbam/PbiBasicTypes.h
/usr/include/pbbam/PbiBuilder.h
/usr/include/pbbam/PbiFile.h
/usr/include/pbbam/PbiFilter.h
/usr/include/pbbam/PbiFilterQuery.h
/usr/include/pbbam/PbiFilterTypes.h
/usr/include/pbbam/PbiIndexedBamReader.h
/usr/include/pbbam/PbiRawData.h
/usr/include/pbbam/Position.h
/usr/include/pbbam/ProgramInfo.h
/usr/include/pbbam/PulseBehavior.h
/usr/include/pbbam/PulseExclusionReason.h
/usr/include/pbbam/QualityValue.h
/usr/include/pbbam/QualityValues.h
/usr/include/pbbam/ReadGroupInfo.h
/usr/include/pbbam/RecordType.h
/usr/include/pbbam/RunMetadata.h
/usr/include/pbbam/SamReader.h
/usr/include/pbbam/SamTagCodec.h
/usr/include/pbbam/SamWriter.h
/usr/include/pbbam/SequenceInfo.h
/usr/include/pbbam/SNR.h
/usr/include/pbbam/Strand.h
/usr/include/pbbam/StringUtilities.h
/usr/include/pbbam/TagCollection.h
/usr/include/pbbam/Tag.h
/usr/include/pbbam/TextFileReader.h
/usr/include/pbbam/TextFileWriter.h
/usr/include/pbbam/Validator.h
/usr/include/pbbam/vcf/VcfFile.h
/usr/include/pbbam/vcf/VcfFormat.h
/usr/include/pbbam/vcf/VcfHeader.h
/usr/include/pbbam/vcf/VcfHeaderTypes.h
/usr/include/pbbam/vcf/VcfQuery.h
/usr/include/pbbam/vcf/VcfReader.h
/usr/include/pbbam/vcf/VcfSort.h
/usr/include/pbbam/vcf/VcfVariant.h
/usr/include/pbbam/vcf/VcfWriter.h
/usr/include/pbbam/virtual/VirtualPolymeraseBamRecord.h
/usr/include/pbbam/virtual/VirtualPolymeraseCompositeReader.h
/usr/include/pbbam/virtual/VirtualPolymeraseReader.h
/usr/include/pbbam/virtual/VirtualRegion.h
/usr/include/pbbam/virtual/VirtualRegionType.h
/usr/include/pbbam/virtual/VirtualRegionTypeMap.h
/usr/include/pbbam/virtual/VirtualZmwBamRecord.h
/usr/include/pbbam/virtual/WhitelistedZmwReadStitcher.h
/usr/include/pbbam/virtual/ZmwReadStitcher.h
/usr/include/pbbam/virtual/ZmwWhitelistVirtualReader.h
/usr/include/pbbam/ZmwGroupQuery.h
/usr/include/pbbam/ZmwQuery.h
/usr/include/pbbam/ZmwType.h
/usr/include/pbbam/ZmwTypeMap.h
/usr/lib/aarch64-linux-gnu/libpbbam.so
/usr/lib/aarch64-linux-gnu/pkgconfig/pbbam.pc
/usr/lib/x86_64-linux-gnu/libpbbam.so
/usr/lib/x86_64-linux-gnu/pkgconfig/pbbam.pc
/usr/share/doc/libpbbam-dev/changelog.Debian.gz
/usr/share/doc/libpbbam-dev/changelog.gz
/usr/share/doc/libpbbam-dev/copyright

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Use this package

OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.

Try Debian 12 (Bookworm) in the browser Build an image that includes libpbbam-dev

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
2.1.0+dfsg-2	bookworm / main	amd64	Debian 12 · main · amd64	87 KiB	609 KiB	pool/main/p/pbbam/libpbbam-dev_2.1.0+dfsg-2_amd64.deb
2.1.0+dfsg-2	bookworm / main	arm64	Debian 12 · main · arm64	87 KiB	609 KiB	pool/main/p/pbbam/libpbbam-dev_2.1.0+dfsg-2_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

2.1.0+dfsg-2 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 0af5d8c2e4502cfca9bf059dabde0751531fd5950f26a01a17b3e37f21eb9d04

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' '0af5d8c2e4502cfca9bf059dabde0751531fd5950f26a01a17b3e37f21eb9d04' 'libpbbam-dev_2.1.0+dfsg-2_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

2.1.0+dfsg-2 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: ff0dd795e78d113b7bc4bb35dd1d34b9bdf7748ec2851f25b4420f4c220e5841

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'ff0dd795e78d113b7bc4bb35dd1d34b9bdf7748ec2851f25b4420f4c220e5841' 'libpbbam-dev_2.1.0+dfsg-2_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 12 (Bookworm) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
Result: match verified
Debian 12 (Bookworm) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/bookworm/InRelease
Signed-object SHA-256
77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
Result: match verified