Linux workstation

Debian 13 (Trixie) native package

r-bioc-dada2

sample inference from amplicon sequencing data

Packages / Debian 13 (Trixie) / gnu-r / r-bioc-dada2

Package: r-bioc-dada2

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

sample inference from amplicon sequencing data

No published records match this suite and architecture filter.

Package file paths (46)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/lib/R/site-library/dada2/CITATION
  • /usr/lib/R/site-library/dada2/data/Rdata.rdb
  • /usr/lib/R/site-library/dada2/data/Rdata.rds
  • /usr/lib/R/site-library/dada2/data/Rdata.rdx
  • /usr/lib/R/site-library/dada2/DESCRIPTION
  • /usr/lib/R/site-library/dada2/doc/dada2-intro.R
  • /usr/lib/R/site-library/dada2/doc/dada2-intro.Rmd
  • /usr/lib/R/site-library/dada2/doc/index.html
  • /usr/lib/R/site-library/dada2/extdata/example_seqs.fa
  • /usr/lib/R/site-library/dada2/extdata/example_species_assignment.fa.gz
  • /usr/lib/R/site-library/dada2/extdata/example_train_set.fa.gz
  • /usr/lib/R/site-library/dada2/extdata/phix_genome.fa
  • /usr/lib/R/site-library/dada2/extdata/sam1F.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam1R.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam2F.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/sam2R.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/samPB.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/samPBprimers.fastq.gz
  • /usr/lib/R/site-library/dada2/extdata/ten_16s.100.fa.gz
  • /usr/lib/R/site-library/dada2/help/aliases.rds
  • /usr/lib/R/site-library/dada2/help/AnIndex
  • /usr/lib/R/site-library/dada2/help/dada2.rdb
  • /usr/lib/R/site-library/dada2/help/dada2.rdx
  • /usr/lib/R/site-library/dada2/help/paths.rds
  • /usr/lib/R/site-library/dada2/html/00Index.html
  • /usr/lib/R/site-library/dada2/html/R.css
  • /usr/lib/R/site-library/dada2/include/dada2.h
  • /usr/lib/R/site-library/dada2/include/dada2_RcppExports.h
  • /usr/lib/R/site-library/dada2/INDEX
  • /usr/lib/R/site-library/dada2/libs/dada2.so
  • /usr/lib/R/site-library/dada2/Meta/data.rds
  • /usr/lib/R/site-library/dada2/Meta/features.rds
  • /usr/lib/R/site-library/dada2/Meta/hsearch.rds
  • /usr/lib/R/site-library/dada2/Meta/links.rds
  • /usr/lib/R/site-library/dada2/Meta/nsInfo.rds
  • /usr/lib/R/site-library/dada2/Meta/package.rds
  • /usr/lib/R/site-library/dada2/Meta/Rd.rds
  • /usr/lib/R/site-library/dada2/Meta/vignette.rds
  • /usr/lib/R/site-library/dada2/NAMESPACE
  • /usr/lib/R/site-library/dada2/NEWS
  • /usr/lib/R/site-library/dada2/R/dada2
  • /usr/lib/R/site-library/dada2/R/dada2.rdb
  • /usr/lib/R/site-library/dada2/R/dada2.rdx
  • /usr/share/doc/r-bioc-dada2/changelog.Debian.gz
  • /usr/share/doc/r-bioc-dada2/copyright
  • /usr/share/lintian/overrides/r-bioc-dada2

Versions, suites, and repositories

Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.

No published records match this suite and architecture filter.

Checksums and observation dates

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

Catalog record completeness

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Sources and provenance

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 13 (Trixie) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
    Result: match verified