Package: r-bioc-oligo (1.70.0+ds-3) Preprocessing tools for oligonucleotide arrays Other Packages Related to r-bioc-oligo:
Package not available
Package not available
[r-bioc-biocgenerics ] (>= 0.13.11)
generic functions for Bioconductor
[r-bioc-oligoclasses ] (>= 1.29.6)
Classes for high-throughput arrays supported by oligo and crlmm
[r-bioc-biobase ] (>= 2.27.3)
base functions for Bioconductor
[r-bioc-biostrings ] (>= 2.35.12)
GNU R string objects representing biological sequences
[r-bioc-affyio ] (>= 1.35.0)
BioConductor tools for parsing Affymetrix data files
[r-bioc-affxparser ] (>= 1.39.4)
Affymetrix File Parsing SDK
[r-cran-dbi ] (>= 0.3.1)
GNU R package providing a generic database interface
[r-cran-ff ]
Memory-Efficient Fast-Access Storage of Large Data
[r-bioc-preprocesscore ] (>= 1.29.0)
BioConductor collection of pre-processing functions
[r-cran-rsqlite ] (>= 1.0.0)
Database Interface R driver for SQLite
[r-bioc-zlibbioc ]
(Virtual) zlibbioc Bioconductor package
[libc6 ] (>= 2.38)
GNU C Library: Shared libraries
[zlib1g ] (>= 1:1.1.4)
compression library - runtime
[r-bioc-genefilter ]
methods for filtering genes from microarray experiments
[r-bioc-limma ]
linear models for microarray data
[r-cran-rcolorbrewer ]
GNU R package providing suitable color palettes
[r-bioc-biocstyle ]
standard styles for vignettes and other Bioconductor documents
[r-cran-knitr ]
GNU R package for dynamic report generation using Literate Programming
[r-cran-runit ]
GNU R package providing unit testing framework
[r-bioc-biomart ]
GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
[r-bioc-annotationdbi ]
GNU R Annotation Database Interface for BioConductor
[r-cran-rcurl ]
GNU R General network (HTTP/FTP/...) client interface
Package file paths (37) Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
/usr/lib/R/site-library/oligo/CITATION /usr/lib/R/site-library/oligo/DESCRIPTION /usr/lib/R/site-library/oligo/doc/index.html /usr/lib/R/site-library/oligo/doc/oug.Rnw /usr/lib/R/site-library/oligo/help/aliases.rds /usr/lib/R/site-library/oligo/help/AnIndex /usr/lib/R/site-library/oligo/help/oligo.rdb /usr/lib/R/site-library/oligo/help/oligo.rdx /usr/lib/R/site-library/oligo/help/paths.rds /usr/lib/R/site-library/oligo/html/00Index.html /usr/lib/R/site-library/oligo/html/R.css /usr/lib/R/site-library/oligo/INDEX /usr/lib/R/site-library/oligo/libs/oligo.so /usr/lib/R/site-library/oligo/Meta/features.rds /usr/lib/R/site-library/oligo/Meta/hsearch.rds /usr/lib/R/site-library/oligo/Meta/links.rds /usr/lib/R/site-library/oligo/Meta/nsInfo.rds /usr/lib/R/site-library/oligo/Meta/package.rds /usr/lib/R/site-library/oligo/Meta/Rd.rds /usr/lib/R/site-library/oligo/Meta/vignette.rds /usr/lib/R/site-library/oligo/NAMESPACE /usr/lib/R/site-library/oligo/NEWS.Rd /usr/lib/R/site-library/oligo/R/oligo /usr/lib/R/site-library/oligo/R/oligo.rdb /usr/lib/R/site-library/oligo/R/oligo.rdx /usr/lib/R/site-library/oligo/scripts/FrameworkPreprocessing.bib /usr/lib/R/site-library/oligo/scripts/getVersions.sh /usr/lib/R/site-library/oligo/scripts/oligoVignette.bib /usr/lib/R/site-library/oligo/scripts/oug.Rnw /usr/lib/R/site-library/oligo/scripts/primer.Rnw /usr/lib/R/site-library/oligo/unitTests/fids_ref0.rda /usr/lib/R/site-library/oligo/unitTests/gen_selector0.R /usr/lib/R/site-library/oligo/unitTests/i0.rda /usr/lib/R/site-library/oligo/unitTests/rma_ref0.rda /usr/share/doc/r-bioc-oligo/changelog.Debian.gz /usr/share/doc/r-bioc-oligo/changelog.gz /usr/share/doc/r-bioc-oligo/copyright Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Use this package OpenFactory can boot this operating system in a browser VM, or start a build that includes the native package name from this record.
Versions, suites, and repositories Each row is recorded package-index metadata for one version, architecture, suite, and repository. Names, URLs, and sizes are source-reported; a link is a potentially mutable retrieval location, not an OpenFactory redistribution claim or proof that OpenFactory retained the artifact bytes.
Checksums and observation dates For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.
1.70.0+ds-3 / amd64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: 2254d1a2624ad08fb7e5bcaf777c96c24ab01c8f80b0a35062fb9e3f2af73dda
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' '2254d1a2624ad08fb7e5bcaf777c96c24ab01c8f80b0a35062fb9e3f2af73dda' 'r-bioc-oligo_1.70.0+ds-3_amd64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
1.70.0+ds-3 / arm64 Observed Sep 1, 2026 to Sep 1, 2026
Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.
Source-reported sha256: bf58c54c1323528b661ee12762dc9f4e83f75152297af61396335060ad6df75c
After downloading that exact artifact, compare its bytes with the source-reported expected digest:
printf '%s %s\n' 'bf58c54c1323528b661ee12762dc9f4e83f75152297af61396335060ad6df75c' 'r-bioc-oligo_1.70.0+ds-3_arm64.deb' | sha256sum --check --strict -A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.
Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Sources and provenance Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: main/binary-amd64/Packages.xz3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b33ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed-object SHA-256 98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint 4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision debian-archive-keyring.gpgSHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy gpgv (GnuPG) 2.4.9
Verification time Sep 1, 2026 Signed Release → package-index hash linkage Path: main/binary-arm64/Packages.xz753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
