Debian 13 (Trixie) native package

python3-biopython

Python3 library for bioinformatics

Packages / Debian 13 (Trixie) / python / python3-biopython

[Source: python-biopython]

Package: python3-biopython (1.85+dfsg-4)

Maintainers:

Debian Med Packaging Team

External Resources:

Homepage: [biopython.org]

Similar packages:

[python3-biopython-sql]
Biopython support for the BioSQL database schema (Python 3)
[python-biopython-doc]
Documentation for the Biopython library

Python3 library for bioinformatics

Other Packages Related to python3-biopython:

dep: [python3] (<< 3.14)
interactive high-level object-oriented language (default python3 version)
dep: [python3] (>= 3.13~)
interactive high-level object-oriented language (default python3 version)
dep: [python3-numpy]
Python library for numerical computations (Python 3)
dep: [python3] [any]
interactive high-level object-oriented language (default python3 version)
dep: [libc6] (>= 2.17)
GNU C Library: Shared libraries
dep: [python3-reportlab] (>= 4.0.4-1~)
ReportLab library to create PDF documents using Python3
dep: [w3c-sgml-lib]
w3.org DTD and catalog files

rec: [python-biopython-doc] (= 1.85+dfsg-4)
Documentation for the Biopython library
rec: [ncbi-blast+]
next generation suite of BLAST sequence search tools

sug: [python3-tk]
Tkinter - Writing Tk applications with Python 3.x
sug: [bwa]
Burrows-Wheeler Aligner
sug: [clustalo]
General-purpose multiple sequence alignment program for proteins
sug: [clustalw]
global multiple nucleotide or peptide sequence alignment
sug: [dialign]
Segment-based multiple sequence alignment
sug: [dssp]
protein secondary structure assignment based on 3D structure
sug: [emboss]
European molecular biology open software suite
sug: [fasttree]
phylogenetic trees from alignments of nucleotide or protein sequences
sug: [mafft]
Multiple alignment program for amino acid or nucleotide sequences
sug: [muscle3]
multiple alignment program of protein sequences
sug: [phylip]
package of programs for inferring phylogenies
sug: [phyml]
Phylogenetic estimation using Maximum Likelihood
sug: [prank]
Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
sug: [probcons]
PROBabilistic CONSistency-based multiple sequence alignment
sug: [python3-mysqldb]
Python interface to MySQL
sug: [python3-matplotlib]
Python based plotting system in a style similar to Matlab
sug: [python3-mmtf]
binary encoding of biological structures (Python 3)
sug: [python3-pil]
Python Imaging Library (Python3)
sug: [python3-rdflib]
Python 3 library containing an RDF triple store and RDF parsers/serializers
sug: [python3-psycopg2]
Python 3 module for PostgreSQL
sug: [python3-scipy]
scientific tools for Python 3
sug: [python3-igraph]
High performance graph data structures and algorithms (Python 3)
sug: [raxml]
Randomized Axelerated Maximum Likelihood of phylogenetic trees
sug: [samtools]
processing sequence alignments in SAM, BAM and CRAM formats
sug: [t-coffee]
Multiple Sequence Alignment
sug: [wise]
comparison of biopolymers, like DNA and protein sequences

Download python3-biopython

Architecture	Package Size	Installed Size	Files
arm64	1.6 MiB	12 MiB	[list of files]

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Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Використати цей пакет

OpenFactory може завантажити цю операційну систему у віртуальній машині браузера або почати збірку образу з рідною назвою пакета з цього запису.

Спробувати Debian 13 (Trixie) у браузері Зібрати образ, що містить python3-biopython

Версії, набори та репозиторії

Кожен рядок: метадані індексу пакетів для однієї версії, архітектури, набору й репозиторію. Назви, URL і розміри зі джерела; посилання є змінним місцем отримання, не перерозповсюдженням OpenFactory.

Version	Release	Architecture	Repository	Package size	Installed size	Publisher repository artifact
1.85+dfsg-4	trixie / main	arm64	Debian 13 · main · arm64	1.6 MiB	12 MiB	pool/main/p/python-biopython/python3-biopython_1.85+dfsg-4_arm64.deb

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Контрольні суми й дати спостереження

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.85+dfsg-4 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: e9c041ceb399db3ed663a6827466b6dbe10a53801f70c16afa38b153eee23942

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s  %s\n' 'e9c041ceb399db3ed663a6827466b6dbe10a53801f70c16afa38b153eee23942' 'python3-biopython_1.85+dfsg-4_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908

Повнота запису каталогу

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description: 25/25
Artifact path and source digest: 25/25
Dependency metadata: 15/15
Package-file index: 15/15
Homepage: 5/5
License text: 0/5
Source package or maintainer: 10/10

Recorded total: 95/100

Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3, Debian 13 (Trixie) main arm64 revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Джерела та походження

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

Debian 13 (Trixie) main amd64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-amd64/Packages.xz
Expected SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Observed SHA-256: 3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3
Result: match verified
Debian 13 (Trixie) main arm64Sep 1, 2026
Authoritative source; repository metadata signature verified, revision trixie-main-arm64:753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.
Repository-signature verification record
Signed object
https://deb.debian.org/debian/dists/trixie/InRelease
Signed-object SHA-256
98b25b5cd185c59d34aa6e4c3e9b5b8f01bbe9d104fe2dcfbcd30dc0a14a59ed
Signer fingerprint
4CB50190207B4758A3F73A796ED0E7B82643E131
Keyring revision
debian-archive-keyring.gpg
SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
Tool and policy
gpgv (GnuPG) 2.4.9
openfactory-software-catalog-signature-v1
Verification time
Sep 1, 2026
Signed Release → package-index hash linkage
Path: main/binary-arm64/Packages.xz
Expected SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Observed SHA-256: 753da751bbc7a679f48bd1b623ffd4479cb6861c426118284c76eb82909e4908
Result: match verified