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Debian 12 (Bookworm) native package

r-bioc-isoformswitchanalyzer

Identify, Annotate and Visualize Alternative Splicing and

Packages / Debian 12 (Bookworm) / gnu-r / r-bioc-isoformswitchanalyzer

Package: r-bioc-isoformswitchanalyzer (1.20.0+ds-1)

Maintainers:

Debian R Packages Maintainers

External Resources:

Homepage: [bioconductor.org]

Identify, Annotate and Visualize Alternative Splicing and

Other Packages Related to r-bioc-isoformswitchanalyzer:

  • dep: [r-base-core] (>= 4.2.2.20221110-1)

    GNU R core of statistical computation and graphics system

  • dep: r-api-4.0

    Package not available

  • dep: r-api-bioc-3.16

    Package not available

  • dep: [r-bioc-limma]

    linear models for microarray data

  • dep: [r-bioc-dexseq]

    GNU R inference of differential exon usage in RNA-Seq

  • dep: [r-cran-ggplot2]

    implementation of the Grammar of Graphics

  • dep: [r-bioc-bsgenome]

    BioConductor infrastructure for Biostrings-based genome data packages

  • dep: [r-cran-plyr]

    tools for splitting, applying and combining data

  • dep: [r-cran-reshape2]

    Flexibly reshape data: a reboot of the reshape package

  • dep: [r-cran-gridextra]

    GNU R package with extensions for the grid package

  • dep: [r-bioc-biostrings] (>= 2.50.0)

    GNU R string objects representing biological sequences

  • dep: [r-bioc-iranges]

    GNU R low-level containers for storing sets of integer ranges

  • dep: [r-bioc-genomicranges]

    BioConductor representation and manipulation of genomic intervals

  • dep: [r-bioc-drimseq]

    Differential transcript usage and tuQTL analyses with

  • dep: [r-cran-rcolorbrewer]

    GNU R package providing suitable color palettes

  • dep: [r-bioc-rtracklayer]

    GNU R interface to genome browsers and their annotation tracks

  • dep: [r-cran-venndiagram]

    Generate High-Resolution Venn and Euler Plots

  • dep: [r-cran-dbi]

    GNU R package providing a generic database interface

  • dep: [r-bioc-genomeinfodb]

    BioConductor utilities for manipulating chromosome identifiers

  • dep: [r-bioc-tximport] (>= 1.7.1)

    transcript-level estimates for biological sequencing

  • dep: [r-bioc-tximeta] (>= 1.7.12)

    Transcript Quantification Import with Automatic Metadata

  • dep: [r-bioc-edger]

    Empirical analysis of digital gene expression data in R

  • dep: [r-cran-futile.logger]

    logging utility for GNU R

  • dep: [r-cran-stringr]

    Make it easier to work with strings

  • dep: [r-cran-dplyr]

    GNU R grammar of data manipulation

  • dep: [r-cran-magrittr]

    GNU R forward-pipe operator

  • dep: [r-cran-readr]

    GNU R package to read rectangular text data

  • dep: [r-cran-tibble]

    GNU R Simple Data Frames

  • dep: [r-bioc-xvector]

    BioConductor representation and manpulation of external sequences

  • dep: [r-bioc-biocgenerics]

    generic functions for Bioconductor

  • dep: [r-cran-rcurl]

    GNU R General network (HTTP/FTP/...) client interface

  • dep: [r-bioc-biobase]

    base functions for Bioconductor

  • sug: [r-cran-knitr]

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  • sug: [r-cran-rmarkdown]

    convert R markdown documents into a variety of formats

Download r-bioc-isoformswitchanalyzer

ArchitecturePackage SizeInstalled SizeFiles
amd643.5 MiB4.1 MiB[list of files]
arm643.5 MiB4.2 MiB[list of files]

Paketdateipfade (57)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/CITATION
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchListAnalyzed.RData
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchListIntermediary.RData
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/data/exampleSwitchList.RData
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/DESCRIPTION
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/index.html
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/IsoformSwitchAnalyzeR.R
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/doc/IsoformSwitchAnalyzeR.Rmd
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/cpat_results.txt
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/cpc2_result.txt
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/aux_info/meta_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/cmd_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep1/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/aux_info/meta_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/cmd_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond1_rep2/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/aux_info/meta_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/cmd_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep1/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/aux_info/meta_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/cmd_info.json
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/drosophila/data_cond2_rep2/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/example.gtf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/example_isoform_nt.fasta.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/Fibroblasts_0/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/Fibroblasts_1/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/hESC_0/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/hESC_1/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iPS_0/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iPS_1/quant.sf.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/iupred2a_result.txt.gz
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/pfam_results.txt
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/extdata/signalP_results.txt
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/aliases.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/AnIndex
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/IsoformSwitchAnalyzeR.rdb
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/IsoformSwitchAnalyzeR.rdx
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/help/paths.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/html/00Index.html
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/html/R.css
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/INDEX
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/libs/IsoformSwitchAnalyzeR.so
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/data.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/features.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/hsearch.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/links.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/nsInfo.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/package.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/Rd.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/Meta/vignette.rds
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/NAMESPACE
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/NEWS
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR.rdb
  • /usr/lib/R/site-library/IsoformSwitchAnalyzeR/R/IsoformSwitchAnalyzeR.rdx
  • /usr/share/doc/r-bioc-isoformswitchanalyzer/changelog.Debian.gz
  • /usr/share/doc/r-bioc-isoformswitchanalyzer/copyright

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Dieses Paket verwenden

OpenFactory kann dieses Betriebssystem in einer Browser-VM starten oder einen Image-Build mit dem nativen Paketnamen aus diesem Datensatz beginnen.

Debian 12 (Bookworm) im Browser testenImage mit r-bioc-isoformswitchanalyzer bauen

Versionen, Suiten und Repositories

Jede Zeile ist Paketindex-Metadaten für eine Version, Architektur, Suite und ein Repository. Namen, URLs und Größen stammen aus der Quelle; ein Link ist ein veränderbarer Abrufort, kein Weitergabanspruch von OpenFactory.

VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.20.0+ds-1bookworm / mainamd64Debian 12 · main · amd643.5 MiB4.1 MiBpool/main/r/r-bioc-isoformswitchanalyzer/r-bioc-isoformswitchanalyzer_1.20.0+ds-1_amd64.deb
1.20.0+ds-1bookworm / mainarm64Debian 12 · main · arm643.5 MiB4.2 MiBpool/main/r/r-bioc-isoformswitchanalyzer/r-bioc-isoformswitchanalyzer_1.20.0+ds-1_arm64.deb

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

Prüfsummen und Beobachtungsdaten

For an APT source, signature verification authenticates the repository metadata chain and the Packages index containing this source-reported artifact digest. It does not certify package safety.

1.20.0+ds-1 / amd64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 0dc76dcc9ba842f2392587382a3f8326a4e4def87bf3d37695e96dadf6eaa5d6

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '0dc76dcc9ba842f2392587382a3f8326a4e4def87bf3d37695e96dadf6eaa5d6' 'r-bioc-isoformswitchanalyzer_1.20.0+ds-1_amd64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

1.20.0+ds-1 / arm64Observed Sep 1, 2026 to Sep 1, 2026

Verification status: Metadata observed; artifact bytes were not independently fetched or hashed by this catalog import. The digest below is source-reported.

Source-reported sha256: 530a6410b29bc12982a954116507847ad0d74721beb93d89b17f08fb8a09001f

After downloading that exact artifact, compare its bytes with the source-reported expected digest:

printf '%s %s\n' '530a6410b29bc12982a954116507847ad0d74721beb93d89b17f08fb8a09001f' 'r-bioc-isoformswitchanalyzer_1.20.0+ds-1_arm64.deb' | sha256sum --check --strict -

A match establishes equality with the repository metadata value. It does not establish safety or catalog-side artifact retrieval.

Field source: Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

Vollständigkeit des Katalogsatzes

The completeness score measures metadata coverage, not software quality, security, compatibility, or suitability.

Summary and description
25/25
Artifact path and source digest
25/25
Dependency metadata
15/15
Package-file index
15/15
Homepage
5/5
License text
0/5
Source package or maintainer
10/10

Recorded total: 95/100

Field source: Debian 12 (Bookworm) main amd64 revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5, Debian 12 (Bookworm) main arm64 revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00. The cross-OS mapping is catalog-derived from the source-reported homepage; it does not establish authorship or publisher identity

Quellen und Herkunft

Field-source links above resolve here. Each source entry names the metadata publisher, trust tier, exact snapshot revision, signature result, and observation time; catalog-derived mappings are labeled separately.

  • Debian 12 (Bookworm) main amd64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-amd64:9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-amd64/Packages.xz
    Expected SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Observed SHA-256: 9e0b5aabb2465b3d2e7a7fe27f9913846277833f7a2826e7767acccff5b588c5
    Result: match verified

  • Debian 12 (Bookworm) main arm64Sep 1, 2026

    Authoritative source; repository metadata signature verified, revision bookworm-main-arm64:2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00

    Signature verification covers the configured repository metadata chain. It does not certify that the package is safe or suitable.

    Repository-signature verification record
    Signed-object SHA-256
    77737fa4b34f2693e982cc9ee35736816c35a7778fc2d326cc1bbf5b301fe1aa
    Signer fingerprint
    4CB50190207B4758A3F73A796ED0E7B82643E131
    Keyring revision
    debian-archive-keyring.gpg
    SHA-256 506b815cbb32d9b6066b4a2aa524071e071761e7e7f68c3ac74f3061ba852017
    Tool and policy
    gpgv (GnuPG) 2.4.9
    openfactory-software-catalog-signature-v1
    Verification time
    Sep 1, 2026
    Signed Release → package-index hash linkage

    Path: main/binary-arm64/Packages.xz
    Expected SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Observed SHA-256: 2ddb1737692e8c45c53e8d57c0ce4cd21c78c5703b830c3226b1423566a06c00
    Result: match verified

r-bioc-isoformswitchanalyzer Package for Debian 12 (Bookworm) | OpenFactory