Packages / Debian 13 (Trixie) / gnu-r / r-bioc-genomicfeatures
Package: r-bioc-genomicfeatures (1.58.0+dfsg-2)
Maintainers:
External Resources:
Homepage: [bioconductor.org]
GNU R tools for making and manipulating transcript centric annotations
Other Packages Related to r-bioc-genomicfeatures:
dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics] (>= 0.51.2)
generic functions for Bioconductor
dep: [r-bioc-s4vectors] (>= 0.17.29)
BioConductor S4 implementation of vectors and lists
dep: [r-bioc-iranges] (>= 2.37.1)
GNU R low-level containers for storing sets of integer ranges
dep: [r-bioc-genomeinfodb] (>= 1.35.8)
BioConductor utilities for manipulating chromosome identifiers
dep: [r-bioc-genomicranges] (>= 1.55.2)
BioConductor representation and manipulation of genomic intervals
dep: [r-bioc-annotationdbi] (>= 1.41.4)
GNU R Annotation Database Interface for BioConductor
dep: [r-cran-dbi]
GNU R package providing a generic database interface
dep: [r-bioc-xvector]
BioConductor representation and manpulation of external sequences
dep: [r-bioc-biostrings]
GNU R string objects representing biological sequences
dep: [r-bioc-rtracklayer]
GNU R interface to genome browsers and their annotation tracks
sug: [r-bioc-txdbmaker]
Tools for making TxDb objects from genomic annotations
sug: [r-bioc-org.hs.eg.db]
genome-wide annotation for Human
sug: [r-bioc-bsgenome]
BioConductor infrastructure for Biostrings-based genome data packages
sug: [r-bioc-rsamtools]
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
sug: [r-bioc-genomicalignments] (>= 1.15.7)
BioConductor representation and manipulation of short genomic alignments
sug: [r-bioc-ensembldb]
GNU R utilities to create and use an Ensembl based annotation database
sug: [r-bioc-annotationfilter]
facilities for filtering Bioconductor annotation resources
sug: [r-cran-runit]
GNU R package providing unit testing framework
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
sug: [r-cran-markdown]
GNU R package providing R bindings to the Sundown Markdown rendering library
Download r-bioc-genomicfeatures
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 908 KiB | 1.5 MiB | [list of files] |
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Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3