Packages / Debian 13 (Trixie) / gnu-r / r-bioc-txdbmaker
Package: r-bioc-txdbmaker (1.2.1+ds-2)
Maintainers:
External Resources:
Homepage: [bioconductor.org]
Tools for making TxDb objects from genomic annotations
Other Packages Related to r-bioc-txdbmaker:
dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics]
generic functions for Bioconductor
dep: [r-bioc-s4vectors]
BioConductor S4 implementation of vectors and lists
dep: [r-bioc-genomeinfodb] (>= 1.39.9)
BioConductor utilities for manipulating chromosome identifiers
dep: [r-bioc-genomicranges]
BioConductor representation and manipulation of genomic intervals
dep: [r-bioc-genomicfeatures]
GNU R tools for making and manipulating transcript centric annotations
dep: [r-cran-httr]
GNU R tools for working with URLs and HTTP
dep: [r-cran-rjson]
GNU R package for converting between R and JSON objects
dep: [r-cran-dbi]
GNU R package providing a generic database interface
dep: [r-cran-rsqlite] (>= 2.0)
Database Interface R driver for SQLite
dep: [r-bioc-iranges]
GNU R low-level containers for storing sets of integer ranges
dep: [r-bioc-ucsc.utils]
Low-level utilities to retrieve data from the UCSC Genome Browser
dep: [r-bioc-annotationdbi]
GNU R Annotation Database Interface for BioConductor
dep: [r-bioc-biobase]
base functions for Bioconductor
dep: [r-bioc-biocio]
standard input and output for Bioconductor packages
dep: [r-bioc-rtracklayer]
GNU R interface to genome browsers and their annotation tracks
dep: [r-bioc-biomart] (>= 2.59.1)
GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
sug: [r-cran-rmariadb]
Database Interface and 'MariaDB' Driver
sug: [r-bioc-ensembldb]
GNU R utilities to create and use an Ensembl based annotation database
sug: [r-cran-runit]
GNU R package providing unit testing framework
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
Download r-bioc-txdbmaker
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 723 KiB | 3.0 MiB | [list of files] |
Package file paths (0)
Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.
No package-associated file paths were observed for the displayed build metadata.
Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3