Packages / Debian 13 (Trixie) / gnu-r / r-bioc-ggbio
Package: r-bioc-ggbio (1.54.0-2)
Maintainers:
External Resources:
Homepage: [bioconductor.org]
Visualization tools for genomic data
Other Packages Related to r-bioc-ggbio:
dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics]
generic functions for Bioconductor
dep: [r-cran-ggplot2] (>= 1.0.0)
implementation of the Grammar of Graphics
dep: [r-cran-gridextra]
GNU R package with extensions for the grid package
dep: [r-cran-scales]
Scale functions for visualization
dep: [r-cran-reshape2]
Flexibly reshape data: a reboot of the reshape package
dep: [r-cran-gtable]
Arrange grobs in tables
dep: [r-cran-hmisc]
GNU R miscellaneous functions by Frank Harrell
dep: [r-bioc-biovizbase] (>= 1.29.2)
GNU R basic graphic utilities for visualization of genomic data
dep: [r-bioc-biobase]
base functions for Bioconductor
dep: [r-bioc-s4vectors] (>= 0.13.13)
BioConductor S4 implementation of vectors and lists
dep: [r-bioc-iranges] (>= 2.11.16)
GNU R low-level containers for storing sets of integer ranges
dep: [r-bioc-genomeinfodb] (>= 1.1.3)
BioConductor utilities for manipulating chromosome identifiers
dep: [r-bioc-genomicranges] (>= 1.29.14)
BioConductor representation and manipulation of genomic intervals
dep: [r-bioc-summarizedexperiment]
BioConductor assay container
dep: [r-bioc-biostrings]
GNU R string objects representing biological sequences
dep: [r-bioc-rsamtools] (>= 1.17.28)
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: [r-bioc-genomicalignments] (>= 1.1.16)
BioConductor representation and manipulation of short genomic alignments
dep: [r-bioc-bsgenome]
BioConductor infrastructure for Biostrings-based genome data packages
dep: [r-bioc-variantannotation] (>= 1.11.4)
BioConductor annotation of genetic variants
dep: [r-bioc-rtracklayer] (>= 1.25.16)
GNU R interface to genome browsers and their annotation tracks
dep: [r-bioc-genomicfeatures] (>= 1.29.11)
GNU R tools for making and manipulating transcript centric annotations
dep: [r-bioc-organismdbi]
smooth interfacing of different database packages
dep: [r-cran-ggally]
GNU R extension to r-cran-ggplot2
dep: [r-bioc-ensembldb] (>= 1.99.13)
GNU R utilities to create and use an Ensembl based annotation database
dep: [r-bioc-annotationdbi]
GNU R Annotation Database Interface for BioConductor
dep: [r-bioc-annotationfilter]
facilities for filtering Bioconductor annotation resources
dep: [r-cran-rlang]
Functions for Base Types and Core R and 'Tidyverse' Features
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-testthat]
GNU R testsuite
sug: [r-cran-tinytex]
GNU R helper to compile LaTeX documents
Download r-bioc-ggbio
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 2.8 MiB | 4.1 MiB | [list of files] |
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Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3