Packages / openSUSE Tumbleweed / Productivity/Scientific/Other / bcftools

[Source: bcftools]

Package: bcftools (1.21-1.5)

Tools for manipulating variant calls in the Variant Call Format (VCF)

Package for the new BCFtools: a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. It contains all the "vcf..." commands which previously lived in the HTSlib repository (such as vcfcheck, vcfmerge, vcfisec, etc.) and the samtools BCF calling from bcftools subdirectory of samtools. BCFtools are meant as a faster replacement for most of the perl VCFtools commands.

Other Packages Related to bcftools:

  • dep: /usr/bin/perl

    Package not available

  • dep: /usr/bin/python3

    Package not available

  • dep: [bgzip]

    Block compression/decompression utility from the HTSlib project

  • dep: [htsfile]

    Identify high-throughput sequencing data files from the HTSlib project

  • dep: libhts.so.3()(64bit)

    Package not available

  • dep: libhts.so.3(HTSLIB_1.0)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.1)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.10)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.13)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.16)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.17)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.2.1)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.3)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.4)(64bit)

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  • dep: libhts.so.3(HTSLIB_1.5)(64bit)

    Package not available

  • dep: libhts.so.3(HTSLIB_1.6)(64bit)

    Package not available

  • dep: libhts.so.3(HTSLIB_1.7)(64bit)

    Package not available

  • dep: libm.so.6()(64bit)

    Package not available

  • dep: libm.so.6(GLIBC_2.2.5)(64bit)

    Package not available

  • dep: libm.so.6(GLIBC_2.23)(64bit)

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  • dep: libm.so.6(GLIBC_2.29)(64bit)

    Package not available

  • dep: libm.so.6(GLIBC_2.43)(64bit)

    Package not available

  • dep: [perl-base]

    The Perl interpreter

  • dep: python3-base

    Package not available

  • dep: python3-matplotlib

    Package not available

  • dep: [tabix]

    Generic indexer for TAB-delimited genome position files from the HTSlib project

  • dep: libc.so.6(GLIBC_2.38)(64bit)

    Package not available

Download bcftools

ArchitecturePackage sizeInstalled sizeFilesPackage
x86_64919 KiB2.8 MiBlist of filesDownload

Package file paths (55)

Paths come from the repository package-file index for the observed builds. They describe archive/package associations, not every file that will exist on a running system after maintainer scripts, alternatives, generated state, diversions, or installation choices.

  • /usr/bin/bcftools
  • /usr/bin/color-chrs.pl
  • /usr/bin/gff2gff.py
  • /usr/bin/guess-ploidy.py
  • /usr/bin/plot-roh.py
  • /usr/bin/plot-vcfstats
  • /usr/bin/run-roh.pl
  • /usr/bin/vcfutils.pl
  • /usr/lib64/bcftools
  • /usr/lib64/bcftools/ad-bias.so
  • /usr/lib64/bcftools/add-variantkey.so
  • /usr/lib64/bcftools/af-dist.so
  • /usr/lib64/bcftools/allele-length.so
  • /usr/lib64/bcftools/check-ploidy.so
  • /usr/lib64/bcftools/check-sparsity.so
  • /usr/lib64/bcftools/color-chrs.so
  • /usr/lib64/bcftools/contrast.so
  • /usr/lib64/bcftools/counts.so
  • /usr/lib64/bcftools/dosage.so
  • /usr/lib64/bcftools/fill-AN-AC.so
  • /usr/lib64/bcftools/fill-from-fasta.so
  • /usr/lib64/bcftools/fill-tags.so
  • /usr/lib64/bcftools/fixploidy.so
  • /usr/lib64/bcftools/fixref.so
  • /usr/lib64/bcftools/frameshifts.so
  • /usr/lib64/bcftools/GTisec.so
  • /usr/lib64/bcftools/GTsubset.so
  • /usr/lib64/bcftools/guess-ploidy.so
  • /usr/lib64/bcftools/gvcfz.so
  • /usr/lib64/bcftools/impute-info.so
  • /usr/lib64/bcftools/indel-stats.so
  • /usr/lib64/bcftools/isecGT.so
  • /usr/lib64/bcftools/mendelian2.so
  • /usr/lib64/bcftools/missing2ref.so
  • /usr/lib64/bcftools/parental-origin.so
  • /usr/lib64/bcftools/prune.so
  • /usr/lib64/bcftools/remove-overlaps.so
  • /usr/lib64/bcftools/scatter.so
  • /usr/lib64/bcftools/setGT.so
  • /usr/lib64/bcftools/smpl-stats.so
  • /usr/lib64/bcftools/split.so
  • /usr/lib64/bcftools/split-vep.so
  • /usr/lib64/bcftools/tag2tag.so
  • /usr/lib64/bcftools/trio-dnm2.so
  • /usr/lib64/bcftools/trio-stats.so
  • /usr/lib64/bcftools/trio-switch-rate.so
  • /usr/lib64/bcftools/variant-distance.so
  • /usr/lib64/bcftools/variantkey-hex.so
  • /usr/share/doc/packages/bcftools
  • /usr/share/doc/packages/bcftools/AUTHORS
  • /usr/share/doc/packages/bcftools/NEWS
  • /usr/share/doc/packages/bcftools/README
  • /usr/share/licenses/bcftools
  • /usr/share/licenses/bcftools/LICENSE
  • /usr/share/man/man1/bcftools.1.gz

Field source: openSUSE Tumbleweed OSS

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VersionReleaseArchitectureRepositoryPackage sizeInstalled sizePublisher repository artifact
1.21-1.5tumbleweed / ossx86_64openSUSE Tumbleweed · OSS · multi-architecture919 KiB2.8 MiBx86_64/bcftools-1.21-1.5.x86_64.rpm

Field source: openSUSE Tumbleweed OSS

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1.21-1.5 / x86_64Observed Sep 1, 2026sha512 83a2283e062a…fc6487feSource-reported digest

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Source-reported digest (sha512): 83a2283e062a01c6b5b4689306930bc12d9bffd830ba71276bc6e829495baeb626715646e644f31bc9187c3d1cea6a07f25f757fabfa344db44b68a3fc6487fe

Field source: openSUSE Tumbleweed OSS

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